Ethanoligenens harbinense: Ethha_1069
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Entry
Ethha_1069 CDS
T01384
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
eha
Ethanoligenens harbinense
Pathway
eha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ethha_1069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eha03021
]
Ethha_1069
03400 DNA repair and recombination proteins [BR:
eha03400
]
Ethha_1069
Enzymes [BR:
eha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ethha_1069
Transcription machinery [BR:
eha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ethha_1069
DNA repair and recombination proteins [BR:
eha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ethha_1069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ADU26622
UniProt:
E6U4J4
LinkDB
All DBs
Position
1178111..1181809
Genome browser
AA seq
1232 aa
AA seq
DB search
MVNVKPVQLGKNVRMSFAHIDEVLDMPNLIEVQKNSYQWFLDEGLKEVFKDVSAITDFTG
NLVLDFVDYTIENQPKYGIEECKERDATYAAPMRVLARLINRETGEVKEQEIFMGDFPLM
TDSGTFVINGAERVIVSQLVRSPGVYYGMQHDKTGKKLFTATVIPNRGAWLEYETDSNDV
FYVRIDKNRKIPVTVFIRALGLGSDAEILDFFGDDDRIKSSIEKDNTKSIEEGLMEVYRK
LRPGEPPTVESAQTHINALFFDPRRYDLSRVGRYKYNKKLAIGNRLTGCTLSRPVANPLT
GEILADAGETLSRARAHEIERAGVDTAFVQVFDREVKVISNGMVDADAFLPFDPEEVGIR
EKVRFSVLREILEAHEGEDDLKAAVEERMDDLIPKHIIIDDIFSSINYLNNLANDIGVID
DIDHLGNRRIRSVGELLQNQFRIGFSRMERVIRERMNLQSQDLDTITPQSIINSRPVMAS
IKEFFGSSPLSQFMDQTNPLAELTHKRRLSALGPGGLSRDRAGFEVRDVHYTHYGRMCPI
ETPEGPNIGLISYLASFARINDYGFIEAPYRKVDKVTGIVSSEVVYMTADVEDEYTVAQA
NEPLDEEGRFARPKVAARHRDEILEIEREKIDYMDVSPKMVVSVATAMIPFLENDDANRA
LMGSNMQRQAVPLLRTDSPIVGTGMEYKAAVDSGVCVLAKEEGVVERVAADEVIIRTDSG
RLDNYHLIKFLRSNQGTCFNQHPIVHHGERVVKGQVLADGPSTSQGEIALGRNVLIGFMT
WEGYNYEDAVLLNEHLVMDDVYTSIHIEEYELEARDTKLGPEEITRDIPNVGEDALRDLD
ERGIIRVGAEVHAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEYG
IVVDVKVFTRENSEELNPGVNMVVRCYIAQKRKISVGDKMAGRHGNKGVVSRVLPAEDMP
FLPDGTPLDIVLNPLGVPSRMNIGQVLEVHLGYAAKALGWKIMTPVFDGAHEGDIAECLK
EAGLREDGKCCLYDGRTGEQFDNPVTVGYMYFLKLAHLVDDKIHARSTGPYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEIQTVKSDDVVGRVKTYEAIVKGQNVPRPGVP
EAFKVLIKELQSLGLDMKVLDKAGEEIDLKDNFDDDDIGLGRVDDQAFSDVAVDSEFEES
FKIGEPEADEASSDEETIDFSSLGMDNDEGNE
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgtgaagcctgtgcagcttggcaaaaatgtgcgcatgagctttgcgcatatc
gacgaggttctggatatgcccaacctcatcgaagtgcaaaagaattcctaccagtggttt
cttgacgaaggcttgaaggaggtctttaaagacgtatccgccatcaccgattttaccggc
aatcttgtgctcgattttgtagattataccatagaaaatcagccgaaatacggcattgag
gaatgtaaggagcgcgacgccacctatgccgcgcccatgcgtgtgctggcccgccttatc
aaccgcgaaaccggcgaggttaaggagcaggagatcttcatgggcgattttccgctcatg
accgacagcggcacctttgtcatcaacggcgcggagcgcgtcatcgtgtcgcagctcgtg
cgttcgccgggcgtctactacggcatgcagcacgacaaaaccggcaaaaagctcttcacc
gccaccgtcatccccaaccgcggtgcatggctcgaatatgagaccgattccaatgatgta
ttctatgtgcgcatcgacaaaaaccgcaaaattcccgtcacggtgttcatccgcgcgctg
ggccttggttccgacgccgagatcctcgactttttcggcgacgacgatcgcatcaagagc
tccattgagaaagacaacaccaaatccatcgaagaaggtctgatggaggtctaccgcaaa
ctgcgccccggcgagccgccgacggtggagagcgcccagacccacatcaacgcgttgttc
ttcgatccgcgccgctatgatctttcccgcgtggggcgttacaaatacaacaaaaaactg
gccatcggcaaccggctgacgggctgtaccctttcgcgcccggtggccaacccgctcacc
ggcgagatccttgccgacgccggtgaaacgctcagccgcgcccgggcgcatgagatcgag
cgcgcgggcgtggacaccgcgtttgtgcaggtgttcgaccgcgaagttaaagtgatttcc
aacggcatggtggacgccgacgcgtttctgccgttcgacccggaagaagtaggcattcgt
gaaaaagtgcgattctccgtgctgcgtgagattttggaggcccacgagggcgaggacgat
ctgaaagccgccgttgaggagcgcatggatgatctcatccccaagcacatcatcatcgac
gacattttctcttccatcaattatctcaacaatctcgccaacgacatcggggtgatcgac
gacatcgaccatctgggcaaccgccgcatccgcagcgtgggcgagctgttgcagaaccag
ttccgcatcggtttttcccgcatggagcgcgtcatccgtgagcgcatgaacctccagtcg
caggatctcgacaccatcacaccgcagtccatcatcaactcccgtccggtcatggcgtcc
atcaaggagttcttcggctcctcgccgctctcgcagtttatggaccagaccaatccgctg
gcggaactcacccataagcgccgtctctccgccctcggtcccggcggtctctcccgtgac
cgcgccggtttcgaggtccgcgacgtgcactatacgcattacggccgcatgtgcccgatc
gagacgccggaaggtccgaacatcggcttgatttcctatctggcttcgttcgcgcgcatc
aacgactacggctttatcgaggcgccttaccgcaaagtggataaggtcaccggtatcgtc
agcagcgaggtggtctatatgaccgccgatgtggaggacgaatacaccgtcgcgcaggcc
aacgaaccgctcgacgaagaagggcggttcgcgcggccgaaagtcgccgcccgccaccgc
gacgagattctggaaatcgagcgcgagaagatcgattacatggacgtttcaccgaagatg
gtggtctcggtcgccacggccatgatcccgttcctcgaaaacgacgacgccaaccgcgcc
ctcatgggttcgaacatgcagcggcaggccgtgccgttgctgcgcaccgattcgcccatc
gtcggcaccggcatggaatacaaggctgcggtggactccggcgtgtgcgtgctcgccaaa
gaagaaggcgtagttgagcgcgtggcggccgatgaagtcatcatccgcaccgattccggc
cggctggacaactaccacctcatcaaatttttacgctccaaccagggcacctgcttcaat
cagcaccccatcgtgcaccacggcgagcgcgtggtcaaagggcaggtgctggcggacggc
ccgtccaccagtcagggcgagatcgcgcttggccgcaacgtgctcatcggtttcatgacg
tgggaaggctacaactacgaggacgccgtcctgctcaacgagcatctggtgatggatgac
gtctatacgtccatccacattgaagaatacgaacttgaggcccgcgacaccaagctcggg
ccggaggagattacccgcgacatccccaacgtgggcgaagacgcgctgcgtgatctggat
gagcgcggcatcatccgcgtgggtgccgaagtgcacgcgggcgacattctggtgggcaag
gtcacgccgaagggcgaaaccgagctgaccgccgaggaacgcctgctgcgcgccatcttc
ggtgaaaaggcgcgcgaggtgcgcgatacctcgctgcgcgtgccgcacggcgaatatggc
atcgtggtggacgtcaaggtgttcacccgcgagaacagcgaggaactcaaccccggtgtc
aacatggtggtgcgctgctatatcgcgcagaagcgcaagatcagcgtgggcgacaagatg
gccggccgccacggcaacaagggcgtcgtctcccgcgtgctgccggcggaggatatgccg
ttcctgccggacggcactccgctggacatcgtgctcaacccgctgggcgtgccgtcgcgc
atgaacatcggacaggtgctggaagtgcacctcggctacgcggccaaagcgctgggctgg
aaaatcatgacgccggtcttcgacggtgcgcatgagggcgacatcgccgagtgcctgaaa
gaagccgggctgcgcgaggacggcaaatgctgcctctacgacggccgcaccggcgagcag
ttcgacaaccccgtcaccgtgggctatatgtacttcctcaaactggcccatctggtcgat
gataagattcatgcccgctccaccggcccgtactcgctggtgacgcagcagcccctcggc
ggtaaagcgcagttcggcggccagcgctttggtgagatggaggtctgggcgctggaggct
tatggcgcagcctacacccttcaggagatccagaccgtcaagtcggatgacgtggtcggc
cgcgtaaagacctacgaagccatcgtgaaagggcagaacgtgccgcgtccgggtgtgccg
gaagcgttcaaggtgctcatcaaggagctccagtcgctgggcctcgatatgaaggtgctt
gataaagcgggcgaggaaatcgacctcaaggataattttgacgatgacgacatcgggctc
gggcgcgtggacgatcaggcgttctccgacgttgccgtggacagcgagtttgaggagagc
ttcaagatcggcgagccggaggcggatgaagcgtcctccgacgaagagaccattgatttc
tcttcgctgggcatggataacgacgaaggcaacgaataa
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