Ethanoligenens harbinense: Ethha_1070
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Entry
Ethha_1070 CDS
T01384
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
eha
Ethanoligenens harbinense
Pathway
eha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ethha_1070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eha03021
]
Ethha_1070
03400 DNA repair and recombination proteins [BR:
eha03400
]
Ethha_1070
Enzymes [BR:
eha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ethha_1070
Transcription machinery [BR:
eha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ethha_1070
DNA repair and recombination proteins [BR:
eha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ethha_1070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Biotin_lipoyl_2
Ribosomal_S3_C
Pkinase_fungal
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ADU26623
UniProt:
E6U4J5
LinkDB
All DBs
Position
1181938..1185495
Genome browser
AA seq
1185 aa
AA seq
DB search
MSRHELGRGRRNLEFNVFDTIKIGLASPDKILEWSHGEVKKPETINYRTLKPERDGLFCE
RIFGPTKDWECHCGKYKRIRYKGKICERCGVEVTRAKVRRERMGHIALAAPVSHIWYFKG
IPSRMGLILDLSPRLLEKVLYFASYIVVDPGNTPLEKKQLLSEKEYRDMREKYEDDFKAG
MGAECIKELLAEIDLDQLGDSLKAELKTSSGQKKVRILKRLEVVEAFRSSGNRPEWMILD
VVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDIIVRNEKRMLQ
EAVDALIDNGRRGRPVTGPNNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPE
LKLYQCGLPKEMALELFKPFVMKRLVETGAASNIKSARKMVERAKNEVFDALEEVIEGHP
VLLNRAPTLHRLGIQAFEPVLVEGRALKLHPLACTAYNADFDGDQMAVHVPLSTEAQAEA
RFLMLAANNLLKPSDGRPVTVPTQDMVLGSYYLTLIKPGEPGEGKVFRDKNEALMAYAEG
VVGLHAPIKVRVSGKVNGKSMTRIIDATVGRVIFNTPIPQDLGYVDRTVEGHELDLEITF
LVGKKELGKIIEKLIKIHGTSQTAAVLDRIKAQGYKYSTRSALTIAVCDATIPPQKKALI
DEAEAKIEGVLKKFRRGLYSDEERFDNVIRIWDETTKKVANALNDNLDRFNPIYMFANSG
ARGSFNQIRQLAGMRGLIANTSGRTIEVPIRANYREGLNILEYFVSSRGARKGLADTALR
TADSGYLTRRLVDVSQEVIIREEDCGTHEGIEVYAIKDGNEMIEPLTDRLVGRYPSEDIL
DPITGEVLADRDTMINDATAAKIVKSGLTEIKIRSVLTCAAKHGVCARCYGANLANGQAV
SVGEAAGIIAAQSIGEPGTQLTMRTFHTGGIASAEDITQGLPRVEELFEARKPKHLAIIS
EIDGEISLHEDKRGRSVTVTNAEQGDSRSYSVPYGSRIHVAEGQRVKAGDLLTEGSVNPH
DILAIKGTKGVQDYLIQEVQRVYRMQGVDINDKHIEVIVRQMMRKLKVEDEGDTDLLPGV
LIDRAELETENAKVRARIEAGEKDLREATASATLLGITKASLATESWLSAASFQETTRVL
TDAAIKGKVDPLLGLKENVIIGKLVPAGTGMKCYRDVDIEPSEEA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcatgaattgggaaggggacggcgcaatttggaattcaatgttttcgatacc
atcaagatcgggcttgcctcgcctgataagattctggaatggtcccacggggaagtcaaa
aagccggaaaccatcaactaccgcaccctcaaaccggagcgggacggcctgttctgcgag
cgtatcttcgggccgaccaaagactgggagtgccattgcggtaaatacaagcgtatccgc
tataaaggcaagatctgcgagcgctgcggcgtggaggtcacccgcgccaaggtgcgccgc
gagcgcatgggccacatcgcgctggcagctcccgtctcccacatctggtattttaagggc
atcccgtcccgcatgggcctgatcctggatctttctccccgtctgctggaaaaagtactg
tattttgcgtcttacatcgtggtggaccccggcaatacgccgcttgagaaaaaacagctg
ctttccgaaaaagaataccgcgatatgcgggaaaaatatgaggacgattttaaggccggc
atgggtgccgaatgcatcaaggaactgctggcggagatcgacctcgaccaactgggcgac
agcctgaaggctgagctgaaaacctcctccggccagaaaaaggtgcgcatcctcaagcgg
ctggaagtggtcgaagcattccgcagttccggcaaccgtccggaatggatgatcctcgac
gtggtgccggttatcccgcccgatctgcgccccatggtgcagctcgacggcggccgtttc
gctacctccgaccttaacgacctctaccgccgcgtcatcaaccggaataaccgcctcaaa
cgcctgctggagctcggcgcaccggacatcatcgtgcgcaacgagaaacgcatgctgcag
gaagcggtggacgcgctcatcgacaacggccgccgcggccgtccggtcaccggcccgaac
aaccgcccgctcaagtcgctctccgacatgctcaagggcaaacagggccggttccgccag
aacctgctcggcaagcgcgtcgattactccggccgttcggtcatcgtggtcgggccggaa
ctgaagctctaccagtgcggtctgccgaaagaaatggcgctggaactgttcaaaccgttt
gtgatgaagcgcctggtagagaccggcgcggccagcaacatcaagagtgcccgcaagatg
gtggagcgcgctaagaatgaagtgttcgacgcgcttgaagaggtcatcgaagggcatccc
gtgctgctcaaccgcgcgccgacgctgcaccgtctgggtattcaggcattcgagccggtg
ctggtggaaggccgcgcgcttaaactgcatccgctggcctgcacggcctacaatgcggac
ttcgacggcgaccagatggccgtgcacgtcccgctgtccaccgaggcgcaggccgaggca
cgcttcctcatgctggcggcgaataacctgctcaaaccgtccgacggccgcccggtcacg
gtgccgacgcaggacatggtgctcggttcctattaccttacgcttatcaagccgggcgaa
ccgggagagggcaaggttttccgcgataaaaatgaagcgctgatggcctacgccgaaggc
gtggtcggcctgcacgcgcccatcaaggtgcgggtgagcggcaaggtgaacggcaagtcc
atgacccgcatcatcgacgccacggtgggtcgcgtcatcttcaacacgcccatcccgcag
gacctcggctatgtggaccgcacggtggaaggccatgagctggatctggagatcaccttc
ttggtcggcaaaaaggaactgggcaagatcatcgaaaagctcattaagatccacggtacg
tcccagaccgctgcggtgctcgaccgcatcaaggcgcagggatataaatattccacccgc
agcgcgctgaccatcgcagtctgcgacgccaccattccgccgcagaaaaaggcgctgatc
gacgaggcggaagccaagatcgaaggcgtgctcaagaaattccgccgcggcttgtattcc
gacgaggaacggttcgacaacgtcattcgtatctgggacgaaaccaccaaaaaagtggcc
aacgccctcaacgacaacctcgaccgcttcaacccgatttatatgtttgccaattccggc
gcccgcggttcgtttaaccagatccgccagctcgccggcatgcgcggcctgatcgccaac
acctccggccgcaccatcgaggtgccgatccgcgccaattaccgcgaaggtctgaacatc
ctcgaatacttcgtttcttcccgcggcgcgcggaaaggtctggccgatacggcgctgcgt
accgccgactcgggttacctcacccgccgtctggtggatgtttcgcaggaggtcatcatc
cgtgaggaagactgcggcacgcacgagggcatcgaggtctacgccatcaaagacggcaac
gaaatgatcgagccgctcaccgaccgtctggtgggccgctatccctccgaggacatcctc
gaccccatcacgggcgaggtgctggccgaccgcgacaccatgatcaacgacgcaacagcg
gccaagatcgtcaaatccggcttgacggaaatcaagattcgctcggtgctcacctgcgcc
gccaagcacggcgtctgcgcccgctgctacggcgccaaccttgccaatggtcaggcggtc
agcgtaggtgaagccgcgggcatcatcgccgcgcagtccatcggcgagccgggcacccag
ctcaccatgcgtacgttccatacgggcggcatcgccagcgccgaggacatcacacagggt
ctgccccgcgtcgaagaactgttcgaggcgcgcaaaccgaagcatctggccatcatttcc
gaaatcgacggcgagatcagcctgcatgaggacaaacgcggccgttccgtcaccgtcacc
aatgcggagcagggagacagccggtcctactccgtgccgtacggctcgcgcatccatgtg
gccgagggccagcgtgtgaaagccggcgatctgctcaccgaaggttcggtcaacccgcac
gacatccttgccatcaagggcaccaagggcgtgcaggattacctcatccaggaagtgcag
cgcgtctaccggatgcagggcgtggatatcaacgacaagcatatcgaggtcatcgtgcgc
cagatgatgcgcaagctgaaagtggaggacgagggcgataccgacctgctgccgggcgtg
ctgattgaccgcgcggagctggagaccgaaaacgccaaggtgcgcgcccgtatcgaggcc
ggcgagaaagacctgcgcgaagccaccgcgagtgcgacactgctgggcatcaccaaggcc
tcgctggccaccgagtcctggctctccgccgcgtccttccaggaaacgacccgcgtgctg
accgacgctgccatcaaaggcaaggtcgatccgctgctcggtctgaaggaaaacgtcatc
atcggcaagctggtgccggccggcaccggaatgaagtgctaccgtgatgtggatatcgag
ccgtccgaagaagcctga
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