Entamoeba histolytica: EHI_013960
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Entry
EHI_013960 CDS
T00238
Symbol
216.t00008
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ehi
Entamoeba histolytica
Pathway
ehi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EHI_013960 (216.t00008)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehi03041
]
EHI_013960 (216.t00008)
Enzymes [BR:
ehi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EHI_013960 (216.t00008)
Spliceosome [BR:
ehi03041
]
Complex A
U2 snRNP components
U2 related factors
EHI_013960 (216.t00008)
Complex B
EHI_013960 (216.t00008)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
3404791
NCBI-ProteinID:
XP_650493
UniProt:
C4LXN8
LinkDB
All DBs
AA seq
722 aa
AA seq
DB search
MDESVDDFDTFMNQMEEESAQQVNEAMGRLKELKGNEIKEIENEENEENEEHERNEGKKE
EARDSEDLADYKDELAQIKKKKLELLDVDHKNIQYEPIHKALYVEVPDIKKLKKEEVKEI
RRIELEGCIVKGKNCPKPIRTWSECGINPITMDVIKALKYEKPSPVQRQAIPVIMSGYDA
IVCAKTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEINKFGKYL
NIRSVAVFGGTGISNQIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVVLDEAD
RMFDMGFGPQIKRIIEGIRPDKQIVMFSATFPISVEQHAREFLKKPIEIICGGRSQVSNT
IEQIVEVIETKKKIERLISIVLEQNNKGGRIIIFTETQKNCDELYQNLMERNINCLLLHG
GIDQIDRQNTIQEFKSGIGRTILITTSLCARGLDVKGLELVINYDCPNHLEDYVHRVGRT
GRAGKRGKAITFITKEEERYSEDIVKALTLSGGSISKELNDMYEEWKTKKLFLETKEGKK
GYGGNGFKFDIKEEITTMENKIGGYMEEDIGGGIKLKERFEEKKMKEEIKESNIPKEKQE
MVQKALQMIERINKRMTKITNNGVQCKIEINDFSIQARQVLTSKEKLISVMENCNVNITT
RGSYIGEGKTPLPGQSKLYLLIEGKNEEDITKAKKEIKNILDEITLKYKDKVLHEKVISN
IL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagtgttgatgatttcgatacattcatgaatcaaatggaagaagaaagtgca
caacaagtcaatgaagcaatgggtcgattgaaagagttaaaaggaaatgaaatcaaagaa
atagagaatgaagaaaatgaggaaaatgaagaacatgaaagaaatgaaggaaaaaaagaa
gaagctcgagacagtgaggatttagcagattacaaagatgaattagcacaaattaagaaa
aagaaattggaattacttgatgttgaccataagaatattcaatatgagccaattcataaa
gcattatatgtagaagtaccagacattaagaaattaaaaaaagaagaagttaaagaaata
agaagaatagagttagaagggtgtattgttaaaggtaaaaattgtcctaagccaattaga
acatggtcagaatgtggaataaatccaattacaatggatgttattaaagcattaaaatat
gaaaaaccaagtccagttcaacgacaagcaattcctgtgataatgtcaggatatgatgca
atagtatgtgcaaaaacagggtcaggaaaaacactagcatatacaataccattaataaaa
catgtcatggcacaaagacctctttctaaaggggaaggaccaattggaattgtatttgcc
ccaattagagaattagcagaacaaattaatacagaaattaataaatttgggaaatattta
aatattagaagtgttgcagtatttggaggaacaggaatttcaaaccaaataggagcatta
aaacgaggaacagaaattgttgtttgtacaccaggaagaatgattgatattttagttact
aataatgggagaattacaaatttaagaagagttacatttgtagttttagatgaagcagat
agaatgtttgatatggggtttggacctcaaattaaaaggattattgaaggaattcgacct
gacaaacaaattgttatgttttcagctacatttcccatttcagtagaacaacatgcacga
gaatttttaaaaaaaccaattgaaattatatgtggaggaagatcacaagtatcaaataca
atagaacaaattgtagaagttattgaaacaaagaaaaagatagagagattaatttccatt
gttttagaacaaaataataaaggaggaagaataattatctttacagaaacacaaaagaat
tgtgatgagttatatcaaaatttaatggaaagaaatattaattgtttattacttcatgga
ggaattgatcaaattgatagacaaaatacaattcaagaatttaagagtggaattggtaga
acaatattaattactacttcattatgtgcaagaggattagatgttaaaggattagaatta
gtaattaattatgattgtcctaatcatttagaagattatgtccaccgagttggtagaaca
ggtagagcaggaaaacgtggtaaggcaataacgtttataacaaaagaagaagaaagatat
agtgaagatattgttaaagcacttactctttcaggaggaagtattagtaaagaacttaat
gatatgtatgaagaatggaaaacaaagaaactatttctagaaacaaaagaaggaaagaaa
ggatatggaggaaatggatttaaatttgatattaaagaagaaatcacaacaatggaaaat
aaaattggaggatatatggaagaggatattggaggagggataaaattaaaagaacgattt
gaagaaaagaaaatgaaagaagaaattaaagaaagtaatattccaaaagaaaaacaagaa
atggttcaaaaagcacttcaaatgattgaacgtattaataaaagaatgacaaaaattaca
aataatggggttcaatgtaaaattgaaattaatgacttttctattcaagcaagacaagta
ttaacaagtaaagaaaaattaataagtgttatggaaaattgtaatgttaatattacaact
agaggaagttatattggagaaggaaaaactccattaccaggacaaagtaaattatatttg
ttgattgaaggaaagaatgaagaagatattaccaaagcaaaaaaagaaattaaaaatatt
ttagatgaaattactttaaaatacaaagataaagtacttcatgaaaaagttatatctaac
attctttaa
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