Eubacterium hominis: H9Q80_17575
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Entry
H9Q80_17575 CDS
T08599
Name
(GenBank) DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ehn
Eubacterium hominis
Pathway
ehn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ehn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H9Q80_17575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehn03400
]
H9Q80_17575
Enzymes [BR:
ehn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
H9Q80_17575
DNA repair and recombination proteins [BR:
ehn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H9Q80_17575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
RNA_ligase
Med6
Motif
Other DBs
NCBI-ProteinID:
QNM12030
UniProt:
A0A7G9GMJ8
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All DBs
Position
3506514..3507446
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AA seq
310 aa
AA seq
DB search
MDFDKRDIRPMLIGVEQPAFDDEDYIYEWKMDGVRCLVYVDEHKAVLQNKRGLLLNRKFP
ELKDIGKQVKHRCILDGELYIFKDGINDFFEVQKRTLTSDPFKIRLHASKYPATFTAFDI
LYDKDQFLVDLPLMKRKQHLSKIIKENERINISRYIEKDGIRLFDLAKQHGLEGIVAKRK
ESKYHIDKRTKEWIKCKNLLDDDFVITGYILKEKGVVSLVMAQYDHQHLTYMGHVSMGVS
LSYLQTHSKKSEDCPFDIYPEGNENAIWIKPFLVGTVKFMEYTKQGGLRQPVFKGFRDDK
LPEECMKKAQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggactttgataaacgggatatccgccctatgttgattggtgttgaacagccggcattt
gatgatgaagattatatctatgaatggaagatggatggtgttcgctgtctggtttatgta
gatgagcataaagctgtcttgcaaaataaacgtggattattattgaatcgaaagtttcca
gagttaaaagatattggcaaacaagtaaagcaccgttgtattctggatggtgagttatat
attttcaaagatggcatcaacgatttctttgaagtacagaaacgtactctaacaagtgat
cctttcaaaatcaggctgcatgcttccaaatatccagctacctttacagcatttgatatc
ttatatgataaagatcaatttcttgtggatctacccttgatgaaaagaaagcagcattta
tcaaaaatcatcaaagaaaatgaaagaatcaatatcagccgctatattgaaaaagatggc
atccgtttgtttgatttggcgaaacaacatggattagaaggcatcgttgccaaacgcaag
gaaagcaaatatcatatagataaacgtacaaaagaatggatcaaatgtaaaaatctttta
gatgatgactttgtgattacaggatatattttaaaagaaaaaggtgttgtttcactggta
atggcacaatatgatcatcaacatcttacctatatggggcatgtcagtatgggtgtttcc
ctttcctatctacaaacgcacagtaagaaaagtgaagactgtccatttgatatttatcct
gaaggaaatgaaaatgcgatatggatcaagccatttctagttggtaccgttaagtttatg
gaatatacaaaacaaggtggccttcgtcaaccggtatttaaaggttttcgtgatgataaa
ttacctgaagagtgtatgaaaaaagcacaatag
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