Eurypyga helias (sunbittern): 104506376
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Entry
104506376 CDS
T08356
Symbol
RC3H2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ehs
Eurypyga helias (sunbittern)
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ehs03000
]
104506376 (RC3H2)
04121 Ubiquitin system [BR:
ehs04121
]
104506376 (RC3H2)
Transcription factors [BR:
ehs03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104506376 (RC3H2)
Ubiquitin system [BR:
ehs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104506376 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104506376
NCBI-ProteinID:
XP_010145610
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIASLESGVPQLIPRCADTSLRALENTKKGGKTGANGQSVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKAPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGEVKKGADYTEDCADTKPDRDIELELSALDTDEPDGQGEQIE
EILDIQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVT
SCFSQPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtccttttgaccagactgccatcaacacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtgcccgat
catcagacagtaaagttgagtaatgtgggagagaacaagcattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttgaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtgacgctggtgaattgt
cagctggtggaggaggagggtcgggttagagctatgagagcagctcgatcacttggagag
agaaccgttacagaactgatcttgcagcaccaaaatcctcagcagctttctgccaacctt
tgggctgctgtcagggcacgagggtgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctagaaccaagatttcctcaggcctctaaaacgagcattggt
catgttgtgcagctactgtatagggcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttatgaggctttgcggagagaacat
gatgctcaaattgttcacattgccatggaagcaggactccgaatctcaccagaacaatgg
tcttcccttctttatggtgacttggcacataaatcgcacatgcaatccattattgacaag
ctccaatctccagagtcttttgcaaagagcgtacaggaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaataggctgaggcctcatttggagcttctggcaaacata
gatccaaatccagatgcagcatctccaacgtgggagcagctggaaaatgcaatggttgct
gtaaagactgtggtacatgggctggtggatttcattcagaattacagtaggaaaggccat
gagactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaaggaggatgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaagtatcgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aataaagttggcgtaaatagcaccgtctcaaccacaacaggaaacgtgatttctgtcata
ggcagccctgaggcaacagggaagatggtgccaagtactaatggaatagctagtctagaa
agtggtgttcctcagctgatccctcgctgtgcggacacctccctgagagctttggagaac
accaagaagggagggaagactggagccaatggccagagtgtttctggatcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccgtttgttcccagagtacctgtctaccctccacattctgataatgttcaatatttccaa
gaccccagaactcagctgtcatatgaagttccacagtacccgcagacaggatattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccgcagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacttcattacgtgagagatacaactctctggatggg
tattactctgtggcttgtcaacctccaaacgagcagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgatgagcagttaagacggaagccggagcaatgg
gcacagtaccacacgcagaaagctcctctggtatcgtcaacccttcctatggcaacacca
tctccaactccaccttctcctctcttcagcgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgccgtgttaatggatttggacagtggggatgttaaaagaagagtgcat
ttatttgaaactcagagaagggcaaaggaagaagatcctataatcccctttagtgatgga
cccatcatctccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacaacg
gatcctattcaggccactgcttcccaaggaagtgctacaaagcccatcagtgtatcagat
tatgtcccttacgtcaatgctgttgactcacgatggagtgcctatggctcagattctgct
tcatcggcacgttacgcagaacgggacaggttcatagttaccgatttgtctggtcacagg
aagcattccagcactggagacttattgagtattgaattacagcaggccaaaagtaactcc
ttattacttcagagagaggcgaatgcactagccatgcaacagaagtggaattctctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaatcgatttgaggaatggtgag
gtaaagaaaggggctgattatactgaagactgtgcagatacaaagccagaccgagacatt
gaattggagctgtcagcccttgatacagatgaacctgatgggcaaggtgaacagatagaa
gagattctggatatacagctaggtattagttctcaagatgatcagctactcaatggaaca
actgtagagaacgggcatccactgaagcagcaccagaaggaatcaatggaacagaagaga
caaagtttaggtgaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaact
tcttgcttcagtcagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagc
acatcagtcagtgttggcagcctcattttgaaaactgctcacattatgtctgaggataaa
aatgactttttaaagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
