Eurypyga helias (sunbittern): 104512293
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Entry
104512293 CDS
T08356
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104512293 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehs03400
]
104512293 (LIG4)
Enzymes [BR:
ehs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104512293 (LIG4)
DNA repair and recombination proteins [BR:
ehs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
104512293 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Tox-REase-9
SKA1
Motif
Other DBs
NCBI-GeneID:
104512293
NCBI-ProteinID:
XP_010153517
UniProt:
A0A093JCA0
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MASAPAAQPSKKTVASRVPFADLCSTLERIQTCKSRPEKTKHFKDFLDSWRKFHDALHQK
EKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRMPA
GSRGDTGDFAMIAYFVLKPRSPKQGRLTIEQVNEHLDAIANNNAAKNKGLLKKSLLQLIT
QSTALEQKWLIRMIIKDLKLGVSQQTIFSVFHPDAAELHNVTTDLEKVCRQLHDPSVSLS
DVSIMLFSAFKPMLAAIADVQQIEKQMNNQIFYIETKLDGERMQMHKDGDVYKYFSRNGF
DYTQQFGASPLDGSLTPFIHNVFNKNIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMVE
DSELQTCFCVFDVLMVNDQKLGHEILSKRYEILSSIFTPVMGRMHVVHKKSARTRKEVID
ALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGSR
GGMMSHFLCAIAETPPPNEKPTVFYSICRVGSGYTMKELHDLGLKLAKHWKPYHRKDPPC
NILCGTEKPEMYIEPCNSVIVQIKAAEIVSSDMYKTDCTLRFPRIEKIREDKEWHECMTS
DMLEDLRSKAEGKLASKHLYIDDYDEPQEKKRKTVSKVKKVIGIAEQFKAPDLSNISKVS
NIFENAEFCVMTGTGEYSKLELESRIAEYGGSVVQNPGPETYCVIAGAENVRVKNTIASN
KYDVVRAEWLLQCFQTKMHVPWQPAFMIHMSPDTKEHFARVYDCYGDSYTADTDVAQLKE
VFSRMKGNTVVPLDVIAELEERYSWNSCPLNIFRGNTIYVDCYAVVNEPRTKIHGTTLSV
RALELRFYGAKVVSHLEEGISHVVVGEDRSRVKEVKAFRRTLGKKFKIVSELWVTESVEE
GVLKNENRYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcacctgctgcgcagccttcaaaaaaaacggtggcctctcgcgtgcctttt
gcagatctgtgttctactctggagcgaatacagacgtgtaaatctcgtccggagaaaacc
aagcatttcaaggattttctggattcctggagaaaattccacgatgctcttcaccaaaaa
gagaaagatgtcacagattctttttatccagctatgcgactgattcttccgcagttggaa
agagaaaggatggcttatggaattaaagaaactatgcttgcaaagctgtatattgaactg
ctaaatttaccgaaagatgggaaagatgctgcaaagcttttaaattacagaatgcctgct
ggctcacgtggcgataccggagattttgcaatgatcgcgtactttgtgttaaaacctagg
agcccaaaacaaggcagattgacaatagaacaagtcaatgaacacttagatgcgatagct
aataataatgcggctaaaaacaagggtctgttaaagaaaagtcttcttcagttaattacc
cagagcacagcgctggaacagaaatggctcatccggatgattataaaggatctgaagctt
ggtgttagtcaacaaaccatattttctgtttttcaccccgatgccgctgaattacataat
gtcacaactgatttggaaaaagtttgcagacaactgcatgatccctctgtctcacttagt
gatgtttctatcatgttgttttctgcctttaaaccaatgcttgctgctattgctgacgtc
cagcaaattgaaaaacaaatgaataaccagatattctacatagaaactaagctggatggt
gaacgtatgcagatgcacaaagatggagatgtgtataagtatttttcccgaaatgggttt
gactatactcagcagtttggtgcttccccccttgatggttcattaacaccgtttattcat
aatgtatttaacaaaaatatacaaaattgcattctcgatggtgaaatgatggcttacaat
cctgagacacagacctttatgcagaaaggcaacaagtttgacatcaaaagaatggtggag
gactctgagctgcagacctgcttttgtgtgttcgatgtccttatggttaacgaccagaag
ttgggtcacgaaatactaagcaagaggtatgaaattttaagtagcatatttaccccggta
atgggcaggatgcatgttgtacataaaaaaagtgccagaacaagaaaagaggtaattgat
gctttaaatgaagcgatagataacagagaggaagggatcatggtgaaagatcccatgtcc
acctacaagcctgacaaacgtggggaaggctggttaaaaatcaagccagaatatgtcaat
gggctgatggatgaactagacctcttaattgttggtggctactggggaaagggctcacgt
ggtggaatgatgtctcattttctgtgcgctattgcagagacgccccctccaaatgaaaaa
cctacagtgttctattctatttgtcgtgttggctctggctatactatgaaggaattgcat
gatctaggtttgaagctggctaaacactggaaaccctaccataggaaggaccctccctgt
aacattttgtgtggaactgaaaaacctgaaatgtacattgaaccgtgcaactctgtcata
gttcagatcaaggcagccgagattgttagcagtgatatgtacaaaacggactgtactttg
agattcccccgaattgagaagataagagaggacaaggaatggcatgagtgcatgacttca
gacatgttagaagatctcagaagcaaagcagaagggaagctggcctctaagcacctttat
atagatgactatgatgagccacaagagaagaaaaggaaaactgtatcaaaggtgaagaag
gtaattggaatagctgagcagtttaaagctcctgatctttctaatataagcaaggtttca
aatatttttgaaaacgctgagttttgtgttatgacaggaacaggagaatattccaagttg
gaactggaaagcagaatagccgaatatggtggcagtgtggtacaaaacccggggccagag
acttattgtgtcattgcaggagctgagaatgtcagagtgaagaacactattgcgtccaac
aaatacgatgtggtgagagcagagtggctccttcagtgtttccaaaccaaaatgcacgtg
ccttggcagccagcctttatgattcacatgtctcctgacacaaaagaacattttgctcgg
gtgtatgattgctatggagacagctacacggcagacacagatgttgcacaactcaaggaa
gtgttctcaaggatgaaaggcaatacggtggtgcctttggacgtgattgcggagttagaa
gaacgttattcgtggaacagctgtccgctcaatatattcagaggaaacactatttatgtg
gactgttatgctgttgttaacgagcccagaaccaaaatccatggaacaacactgtccgtt
agagctttggagctccgtttttatggtgcaaaagtagtctcgcaccttgaggagggcatc
tcccatgttgttgtaggagaagatcgttcccgggtaaaagaggtaaaagcattcaggaga
acacttgggaaaaagtttaaaattgtgtctgagctgtgggtgacagagtcagtggaggaa
ggagtccttaagaatgaaaatcggtacttaatttaa
DBGET
integrated database retrieval system
