Emiliania huxleyi: EMIHUDRAFT_450287
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Entry
EMIHUDRAFT_450287 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ehx
Emiliania huxleyi
Pathway
ehx03022
Basal transcription factors
ehx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EMIHUDRAFT_450287
09124 Replication and repair
03420 Nucleotide excision repair
EMIHUDRAFT_450287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_450287
03400 DNA repair and recombination proteins [BR:
ehx03400
]
EMIHUDRAFT_450287
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EMIHUDRAFT_450287
DNA repair and recombination proteins [BR:
ehx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EMIHUDRAFT_450287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
17272013
NCBI-ProteinID:
XP_005778896
JGI:
Emihu1_450287
UniProt:
R1CUX6
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MAVAADALVQYLSSLPPVNLDRLYADSWVCHALLRALPPLARLYVVRLAAAHGSLPKALV
DSWPARVREAAKRHEESMQQLHLLRLVHRVPAAGSGQEQLRLHEAFGAAMLDSLGQGPPG
LADDASARHGKDKNMVGADELERMGAAKWERLMSRVWKVLLAYTNFRLYAHSSSELRARV
LRSFALLSYQLPGLIVGSLTRTSIQHAVDSGVDAAAIVAYLERNAHPLMAAQTPVLPETV
VNQIHLWAKERSRMAADRCKLYDAFDSLRRFDEACTYAREIGAHLWSRRFPEERNLHKCS
LAVRAEAHGSMKSFLRAAA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagcggacgctcttgtccagtacctctcctcgttgccgcctgtcaacctc
gaccggctgtacgcggattcatgggtctgccacgccctcctccgcgctctgccgccgctc
gcccggctctacgtggtccggctcgcggcggcgcacggcagtctgccaaaggccctcgtc
gactcgtggcccgcacgcgtgcgcgaggcggcgaagcggcacgaggagtcgatgcagcag
ctgcacctgctccgcctcgtgcaccgcgtgcccgccgcgggctccgggcaagagcagctg
cggctgcacgaggcgtttggcgcagcgatgctcgactcactggggcagggcccgccgggc
ctcgcagacgatgcgagcgcgaggcacggcaaggacaagaacatggtcggcgccgacgag
ctcgagcggatgggcgccgccaagtgggagaggctgatgtcgcgtgtgtggaaggtcctc
ctcgcgtacaccaatttccggctgtacgcgcactcgtcgtccgagctgcgcgcgcgcgtg
ctgcgctccttcgccctgctcagctaccagctgcccggcctcatcgtcggctcactcacc
cgcacctcgatccagcacgcggtcgactcgggcgtcgacgcggccgcgatcgtggcctac
ctcgagcggaacgcgcacccgctcatggcagcgcagacgccggtgctgccggagacggtc
gtcaaccagatccacctgtgggccaaggagcgctcgcgcatggccgccgacaggtgcaag
ctctacgacgcattcgactcgctccgccgcttcgacgaggcgtgcacctacgcgcgcgag
atcggagcgcacctttggtcgcgccgctttccggaggagcgcaatctgcacaagtgctcg
ctcgctgtccgcgccgaggcgcacggcagcatgaagagcttcctcagggcggcagcctga
DBGET
integrated database retrieval system
