Emiliania huxleyi: EMIHUDRAFT_453346
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Entry
EMIHUDRAFT_453346 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
ehx
Emiliania huxleyi
Pathway
ehx03013
Nucleocytoplasmic transport
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_453346
09122 Translation
03013 Nucleocytoplasmic transport
EMIHUDRAFT_453346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_453346
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_453346
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
EMIHUDRAFT_453346
Spliceosome [BR:
ehx03041
]
Complex C
Other components
EJC/TREX
EMIHUDRAFT_453346
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
EMIHUDRAFT_453346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
LprI
Motif
Other DBs
NCBI-GeneID:
17253718
NCBI-ProteinID:
XP_005759997
JGI:
Emihu1_453346
UniProt:
R1BCY2
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MSGDNFAAAQSRLASVLEEGVRADGLAGAAFVDSVVAAVRGAGASSGEAATSGAEGANGA
AAKAEPLDAEERGTLELSMRIFLERKSSAGAAGALVVALIDRSIELATARAADLNTPFAL
MEDLFDSQVISESEALFPQIEQRGAALAKLMRSTNNRAKLTFIRTCNELLRRLSKSKNTN
FCGRVLLLMAYMLPLSERSGVNLKGAMAPSDLELQPDEAADDKQEGSAAEDGSLYASFWG
LQAAFADPAAAVKPESWATLVSRLETVLQEAAEKLRARAFELFAGIAPNGPLFAAALERL
LVRERHWLEWKRDGCAAFDRAATEAESAPLAAGGAKKRRSGAAARAGGKRQQLGNSELSR
LWNLGDNSLASIAAEGNKQAVPSLSAYLQPLVEQLDPEAGIEKEYLLTNDKVWMWKALRL
MSKKDVSLLGKISAQGGSMEAAVNHFVEKQKGNAGGEEGGEATAMETE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgacaacttcgccgccgcgcagtcgcgcctcgcctcagtcctagaggagggc
gtgcgggccgacgggctggcgggcgccgcctttgtcgacagcgttgtcgccgccgtcagg
ggcgcgggcgcaagcagcggcgaggcggcgacgagcggcgcagagggggccaacggcgcg
gcggccaaggcggagccgctcgacgcggaggagcggggcacgctcgagctgtcgatgcgc
atcttcctcgagcgtaagtcgagcgccggcgcggccggcgcgctggtcgtcgcgctgatc
gaccggtcgattgagctggcgacggcgagggcggcggacctgaacacgccgttcgcgttg
atggaggacctcttcgactcgcaggtcatctccgaatcggaggcgctcttcccgcagatc
gagcagcgcggcgcggcgctcgccaagctgatgcgctcgaccaacaaccgcgccaagctg
accttcatccgcacctgcaacgagctgctccgccggctctcaaagtcgaagaacaccaac
ttttgcgggcgcgtgctgctgctcatggcgtacatgctcccgctctcggagcgctccggt
gtcaacctcaagggcgcgatggccccctccgacctcgagctccagcccgacgaggcggca
gacgacaagcaggaggggagcgcggcggaggacgggtcgctgtacgcctccttctggggg
ctgcaggccgccttcgccgaccccgccgccgccgtcaagccagagtcatgggccactctc
gtctcgcgcctcgagaccgtgctgcaggaggcggccgagaaactgcgcgcgcgcgccttc
gagctgttcgccggcatcgcacccaacggccctctcttcgcggcggcgctcgagcggctc
ctcgtgcgggagcggcactggctcgagtggaagcgcgacggctgcgccgccttcgaccgg
gccgccaccgaggcggagagcgcgccgctggcggcgggcggcgccaagaagcggcgcagc
ggcgcggcggcgcgcgcgggcggcaagcggcagcagctgggcaactcggagctgtctcgg
ctgtggaacttgggcgacaactcgctcgcgtcgatcgccgcggaggggaacaagcaggcg
gtgccgagcctgtctgcgtacctgcagccgctcgtcgagcagctcgaccccgaggcgggg
atcgagaaggagtacctgctcaccaacgacaaggtctggatgtggaaggcgttgcgcctg
atgagcaagaaggacgtctccctcctcggcaagatctcggcgcagggagggtcgatggag
gcggccgtcaaccactttgtcgagaagcagaagggcaacgccggcggcgaggagggcgga
gaggccaccgcgatggagaccgagtga
DBGET
integrated database retrieval system