Emiliania huxleyi: EMIHUDRAFT_455206
Help
Entry
EMIHUDRAFT_455206 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_455206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_455206
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_455206
Spliceosome [BR:
ehx03041
]
Complex A
U2 snRNP components
U2 related factors
EMIHUDRAFT_455206
Complex B
EMIHUDRAFT_455206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RRM_1
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
17281252
NCBI-ProteinID:
XP_005788339
JGI:
Emihu1_455206
UniProt:
R1FAC2
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MPAKRGREGGPPDEDADKRPRQAAGPSDATPGDALEALRAKRQAKLSSEQAAAAESSSAL
SERAAGKQPAASSAQGAAASRTRAPGGDADESYFDDDEPQQPRPAGATNGVGHTNGVGGS
HHGNGAGSSGHAPGEGADAAAGEDAAADPLEAYMAHVSSRLYLGKEGDGEERAAQRTSRC
VCFENLISPERAAAAADEAHQVRMETGTECSRWGTLLRVHVPSGADAAEGGAPPPGGGLG
RVFVEFEAEDAAVECARALDGRLFDGRRVTALYYPLGAFYEGDFADEGAPLQATSITWDD
IVAMNSRPASSWDTMDGEGGGGAASGGGNPYGQSDALVEEFPDMAEHADVDSDSDSDAEA
AKLAEVARAKKKELPRVDHSTVTYLPFRKNFYIEVPEIKRMSDEEVAATRLAMDKLKVRG
KRVPKPIKKWTQCGLSDAVLAVIEKSGYAAPFPIQSQALPTIMQDVIAIAKTGSGKTMGY
TLPMLRHVLDQPPLEKNDGPISLIMVPTRELAMQVYREVHKFARLTRIRVVPVYGGAGIK
QQISELRRGAEVVVCTPGRMIDMLTANGGRVTNLQRVTYV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaagcgcgggcgagagggcgggccgcctgacgaggacgcggataaacgcccg
cgccaagcagccgggcccagcgacgccactcccggcgacgcgctcgaggcgctccgcgcc
aaacgccaggccaagctctcttccgagcaggcggccgcggccgagtcttcgtcggcgctg
tcggagagggcggcgggcaagcagccggcggcctcctccgcgcaaggcgcggccgcctcc
cgcacccgcgcgccgggcggcgacgccgacgagtcgtatttcgacgatgacgagccgcag
cagccgcggccggcgggcgcgaccaacggcgtcggccacaccaacggcgtgggcggcagc
caccacggcaacggtgccggcagcagcggccacgcgccgggcgagggcgcggatgcagcg
gctggcgaggatgcggcggccgatcctctcgaggcgtacatggcgcacgtgtcgtcgcgg
ctgtacctggggaaggagggggacggggaggagagggcggcgcagcgcacctcgcgctgc
gtctgcttcgagaacctcatctcgcccgagcgcgccgccgccgctgccgacgaggcgcac
caggtccggatggagacggggacagagtgctcccgctgggggacgctgctgcgtgtgcac
gtgccgagcggggcggacgcggcggaggggggagcccctcccccggggggggggctcggc
cgcgtctttgtcgagttcgaggccgaggacgccgccgtcgagtgcgcgcgcgcgctggat
ggccggctctttgatggccggcgagtgacggcactctactacccgctgggcgccttctac
gagggggactttgcggacgagggcgccccgctgcaggcgacgtccatcacctgggacgat
atcgtcgcgatgaactcgcgaccggccagctcgtgggacacgatggacggcgagggcggc
ggcggcgccgcgagcggaggaggcaacccgtatggccagagcgacgcgctcgttgaggag
tttccggacatggcggagcatgcggacgtcgactccgactccgactccgacgccgaggcc
gccaagctggccgaagtggcgcgcgccaagaagaaggagctgccgcgcgtcgaccactcg
accgtcacctacctgccgttccgaaagaacttttacatagaggtgccggagatcaagcgc
atgagcgacgaggaggtcgccgccacgcgcctcgcgatggacaagctcaaggtgcgcggc
aagcgcgtgcccaagccgatcaagaagtggacgcagtgcggcctctccgacgccgtcctc
gccgtcatcgagaagagcggctacgcggcgcccttcccgatccagtcgcaggcactgccc
acgatcatgcaggacgtcatcgccatcgccaagaccggctccggcaagacgatgggctac
acgctgccgatgttgcgacacgtgctcgaccagccgccgctcgagaagaacgacgggccg
atctctctcatcatggtcccgacgcgcgagctcgccatgcaggtctaccgcgaggtgcac
aagttcgcgcggctcacccgcatccgcgtggtcccggtgtacggcggcgccggcatcaag
cagcagatctccgagctgcggcgcggcgccgaggtcgtcgtctgcacgccaggccggatg
attgacatgctcaccgccaacggcggccgcgtcaccaacctgcagcgcgtcacgtacgtg
DBGET
integrated database retrieval system
