Emiliania huxleyi: EMIHUDRAFT_464582
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Entry
EMIHUDRAFT_464582 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ehx
Emiliania huxleyi
Pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_464582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_464582
Enzymes [BR:
ehx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EMIHUDRAFT_464582
Spliceosome [BR:
ehx03041
]
Complex A
U2 snRNP components
U2 related factors
EMIHUDRAFT_464582
Complex B
EMIHUDRAFT_464582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RRM_1
ResIII
Motif
Other DBs
NCBI-GeneID:
17260268
NCBI-ProteinID:
XP_005766500
JGI:
Emihu1_464582
UniProt:
R1DTG7
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MPAAKRGREGGPPDEDADKRPRQAAGPSDATPGDALEALRAKRQAKLSSEQAAAAESSSA
LSERAAGKQPAASSAQGATASRTRAPGGDADESYFDDDEPQQPRPAGATNGVGHTNGVGG
SHHGNGAGSSGHAPGEGADAAAGEDAAADPLEAYMAHVSSRLYLGKEGDGEERAAQRTSR
CVCFENLISPERAAAAADEAHQVRMETGTECSRWGTLLRVHVPSGADAAEGGAPPPGGGL
GRVFVEFEAEDAAVECARALDGRLFDGRRVTALYYPLGAFYEGDFADEGAPLQATSITWD
DIVAMNSRPASSWDTMDGEGGGGAASGGGNPYGQSDALLDLAERPRALVEEFPDMAEHAD
VDSDSDSDAEAAKLAEVARAKKKELPRVDHSTVTYLPFRKNFYIEVPEIKRMSDEEVAAT
RLAMDKLKVRGKRVPKPIKKWTQCGLSDAVLAVIEKSGYAAPFPIQSQALPTIMQDVIAI
AKTGSGKTMGYTLPMLRHVLDQPPLEKNDGPISLIMVPTRELAMQVYREVHKFARLTRIR
VVPVYGGAGIKQQISELRRGAEVVVCTPGRMIDMLTANGGRVTNLQRVTYVVQSELLKAA
AKAGAGAAAASVSGAAAPSAAPLPPPTNPRLANLPEATQRAIAAATAKAQLAANKFALPG
AAGASAAPTLMAPLMPQRHVSELEINDYPQTARFKVTSRETIQGIEEWTKAAVITKGTYY
PPGRNAPPGERKLYLHIEAETHEAMKAARKELKRVLQEQSVFSAPDDSSTNRYAKYSV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgccaagcgcgggcgagagggcgggccgcctgacgaggacgcggataaacgc
ccgcgccaagcagccgggcccagcgacgccactcccggcgacgcgctcgaggcgctccgc
gccaaacgccaggccaagctctcttccgagcaggcggccgcggcggagtcttcgtcggcg
ctgtcggagagggcggcgggcaagcagccggcggcctcctccgcgcaaggcgcgaccgcc
tcccgcacccgcgcgccgggcggcgacgccgacgagtcgtatttcgacgatgacgagccg
cagcagccgcggccggcgggcgcgaccaacggcgtcggccacaccaacggcgtgggcggc
agccaccacggcaacggtgccggcagcagcggccacgcaccgggcgagggcgcggatgca
gcggctggcgaggatgcggcggccgatcctctcgaggcgtacatggcgcacgtgtcgtcg
cggctgtacctggggaaggagggggacggggaggagagggcggcgcagcgcacctcgcgc
tgcgtctgcttcgagaacctcatctcgcccgagcgcgccgccgccgctgccgacgaggcg
caccaggtccggatggagacggggacagagtgctcccgctgggggacgctgctgcgtgtg
cacgtgccgagcggggcggacgcggcggaggggggagccccacccccggggggggggctc
ggccgcgtctttgtcgagttcgaggccgaggacgccgccgtcgagtgcgcgcgcgcgctg
gatggccggctctttgatggccggcgagtgacggcactctactacccgctgggcgccttc
tacgagggggactttgcggacgagggcgccccgctgcaggcgacgtccatcacctgggac
gatatcgtcgcgatgaactcgcgaccggccagctcgtgggacacgatggacggcgagggc
ggcggcggcgccgcgagcggaggaggcaacccgtatggccagagcgacgcgctcctcgac
ctcgcggagcggccgagggcgctcgttgaggagtttccggacatggcggagcatgcggac
gtcgactccgactccgactccgacgccgaggccgccaagctggccgaagtggcgcgcgcc
aagaagaaggagctgccgcgcgtcgaccactcgaccgtcacctacctgccgttccgaaag
aacttttacatcgaggtgccggagatcaagcgcatgagcgacgaggaggtcgccgccacg
cgcctcgcgatggacaagctcaaggtgcgcggcaagcgcgtgcccaagccgatcaagaag
tggacgcagtgcggcctctccgacgccgtcctcgccgtcatcgagaagagcggctacgcg
gcgcccttcccgatccagtcgcaggcactgcccacgatcatgcaggacgtcatcgccatc
gccaagaccggctccggcaagacgatgggctacacgctgccgatgttgcgacacgtgctc
gaccagccgccgctcgagaagaacgacgggccgatctctctcatcatggtcccgacgcgc
gagctcgccatgcaggtctaccgcgaggtgcacaagttcgcgcggctcacccgcatccgc
gtggtcccggtgtacggcggcgccggcatcaagcagcagatctccgagctgcggcgcggc
gccgaggtcgtcgtctgcacgccaggccggatgattgacatgctcaccgccaacggcggc
cgcgtcaccaacctgcagcgcgtcacgtacgtggtgcagagcgagctgctcaaggcggcc
gccaaggcgggcgccggcgccgccgccgcgtccgtctcgggagccgcagcgccttcggcc
gcgccgctgccgccgcccacgaacccgcggctggccaacctgcccgaagcgacgcagcgc
gcgatcgccgccgccacagcaaaggcgcagctcgcggcgaacaagtttgcgctgcccggg
gcggccggcgccagcgccgcgccgacgctgatggcgccgctgatgccgcagcggcacgtc
tcggagctggagatcaacgactacccgcagacggcgcggttcaaggtcacgagccgcgag
acgatccagggcatcgaggagtggaccaaggcggcagtcatcactaagggcacctactac
ccgcccggccgcaacgcgccgcccggcgagcgcaagctctacttgcacatcgaggcggag
acgcacgaggcgatgaaggctgcgcgcaaggagctcaagcgcgtgctgcaggagcagtcc
gtcttctccgcgcccgacgactcgtccaccaaccgatacgccaagtactcggtatga
DBGET
integrated database retrieval system
