Entamoeba invadens: EIN_096050
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Entry
EIN_096050 CDS
T04133
Name
(RefSeq) histone deacetylase, putative
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
eiv
Entamoeba invadens
Pathway
eiv03082
ATP-dependent chromatin remodeling
eiv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EIN_096050
03083 Polycomb repressive complex
EIN_096050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eiv03036
]
EIN_096050
Enzymes [BR:
eiv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
EIN_096050
Chromosome and associated proteins [BR:
eiv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
EIN_096050
HDAC complexes
Sin3A-HDAC complex
EIN_096050
BRAF-HDAC complex
EIN_096050
REST complex
EIN_096050
SHIP complex
EIN_096050
MiDAC complex
EIN_096050
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
EIN_096050
Heterochromatin formation proteins
Other heterochromatin formation proteins
EIN_096050
Chromatin remodeling factors
NuRD complex
EIN_096050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
14886171
NCBI-ProteinID:
XP_004254119
UniProt:
A0A0A1U3P1
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MTRVCYFYDHNVGEFDYGFGHPMKPLRNKLVHHLIMEYGIYQRLNIYKPWRATNEQLEMF
HSKDYIDFLQRVTPEMAQLQHFRRSLEEFNFTDDCPVFDGLYPFVQTVVGSSLGCAMKIN
ERAADVCVNWSGGLHHAKKSQASGFCYINDIVCAILELLKVHSRVLYIDIDHHHGDGVEE
AFKATNRVMTLSLHKYGDNYFPGTGDVDEVGVDEGKNYSINVPLKDGINDDYYHKLFNPI
IDRAMEVFQPGAVVMQCGADSLNGDRLGFFNLSIQGHCECMKRVKAFGLPMILVGGGGYT
VSNTARCWCYETAAACDLTIPDQIPVNDYLEYYVPDLKITIPTSAQMKNCNSRNYCDDIL
GKVMQVLEEVGNSTLPSLQFKAPPRHDEHTIDMEVDEDMNTFDDAVKGFTRDIPMNMDNE
DVLKMYTEPLPIFPKSKLFCTDKDMKFFE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacaagagtctgctatttctacgatcataacgtgggtgaattcgactacgggttcgga
catccaatgaaaccgttgcgcaacaagttggtccatcacctcataatggagtatggcata
taccaacgcctcaacatttacaagccttggagagcaacaaacgagcaactggaaatgttc
cactcaaaagactatattgactttttgcagagagtcacaccagagatggcgcaactccag
cacttcagaagatcattggaagagttcaacttcaccgacgattgtccagtttttgacgga
ctttacccgtttgtccaaactgtagttgggagttcgttgggctgcgccatgaaaattaat
gagcgagctgctgacgtttgtgtgaactggtctggcggacttcaccacgccaaaaagtca
caagcctctggattttgttacatcaacgacattgtgtgtgcgattttggagctgctcaaa
gtgcactcgagggtactttatattgacattgatcatcaccacggagatggagtagaagag
gcgttcaaagcgacgaacagggtgatgacattatctctacacaaatatggcgacaactac
ttcccaggaaccggagacgtggacgaggttggtgttgacgaaggcaaaaattactcaatc
aatgtcccactgaaagacggtataaacgacgattattatcacaaacttttcaacccaata
attgaccgagcgatggaagttttccagccaggtgctgtcgtcatgcaatgtggagccgac
agtttgaatggtgacaggcttggtttcttcaatttaagtatccaaggccattgtgagtgc
atgaaaagggtcaaagcctttggtctgccaatgattctagttggtggtggcggatatact
gtcagcaataccgctcggtgttggtgttatgagactgctgctgcgtgtgatctaaccatc
ccagaccagataccagtgaatgattatcttgagtattacgttcctgacttgaagattact
attcccacgagtgcccaaatgaaaaattgcaattcccgaaattattgtgatgatatctta
ggaaaagtcatgcaagttttagaggaagttgggaactcaacacttccgagtttacagttc
aaggccccaccaagacatgacgaacacactatagatatggaagtggacgaggatatgaac
acgttcgacgacgcggttaagggattcactcgggacatcccaatgaatatggacaacgaa
gacgtcctcaaaatgtacacggaaccactccccatcttcccgaagtcaaaattgttctgt
acagacaaggatatgaagttctttgagtga
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integrated database retrieval system