Entamoeba invadens: EIN_485720
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Entry
EIN_485720 CDS
T04133
Name
(RefSeq) TFIIH basal transcription factor complex p44 subunit, putative
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
eiv
Entamoeba invadens
Pathway
eiv03022
Basal transcription factors
eiv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EIN_485720
09124 Replication and repair
03420 Nucleotide excision repair
EIN_485720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eiv03021
]
EIN_485720
03400 DNA repair and recombination proteins [BR:
eiv03400
]
EIN_485720
Transcription machinery [BR:
eiv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EIN_485720
DNA repair and recombination proteins [BR:
eiv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EIN_485720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Tfb4
Motif
Other DBs
NCBI-GeneID:
14888173
NCBI-ProteinID:
XP_004255951
UniProt:
A0A0A1U7Y5
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MKKKQEDSQISSTFESWKTWERRNEFSADSRSRRGLQRSVLFVIDMSYPMNYEDFHPTRI
SFINTKMNNFFDNFFVDNPLSQIGLVATRNSTADIICPLTRNISKLKETAWGKCNGSISV
QISLELCLQFLKDTKDMTSREIVFVTSAISTCDPGNIFETIGKVRDNLIRVSVISISAEV
HVMRQMTKVTGGDYFTIMNEKHAEEVIKTFIEPPRYKATGKEPKVELLFVGFPRELERST
ICECHSKIGLGHYECPVCGFCYCELPVECKVCKANLIFSHHFARSFHFLFPVKPFVLEKE
PEVCFACGKKYEEKKDEEMKFWKCEKCSKSFCETCNIFIHDVLFNCPGCENNKVVLSN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaagcaggaggactcccaaatatcatccacatttgagagctggaaaacttgg
gaaaggagaaacgagttttctgcagacagccggtcaagaagaggattgcaacggtctgtc
ttgtttgttatagacatgtcgtatccgatgaattatgaagacttccacccaacgaggata
tcattcatcaacaccaaaatgaataacttcttcgacaacttctttgtcgataacccactc
tcacaaattggtcttgtcgcaacacgaaatagcaccgcagacatcatttgcccactcaca
agaaacatttctaagttgaaggaaactgcgtgggggaagtgcaatggatcgatatcagtg
caaatatcactggagctctgtttgcagttcctcaaagataccaaagacatgaccagtcga
gaaatcgtttttgtgacttctgcaatatcaacgtgcgaccctgggaacatattcgagacg
attgggaaagtcagagacaacttgatcagagtctctgttatcagcatttccgcagaagtc
cacgtgatgcgacaaatgacgaaagtcactggaggagactacttcactataatgaatgaa
aagcacgccgaagaagtcattaaaacgttcatcgaaccaccgaggtataaagcgactggc
aaggagcccaaagtcgagctcttgtttgtaggctttccaagagaacttgagcgatcgact
atatgtgagtgtcactccaaaattgggttggggcattatgaatgccctgtttgtgggttt
tgctattgcgaactgcccgtggagtgtaaggtgtgtaaagcaaatttgatattttctcac
cactttgcacgatcattccacttcttgttcccggtgaaaccatttgtgcttgaaaaggag
cctgaagtgtgtttcgcgtgtggtaaaaagtatgaggaaaagaaggatgaggaaatgaag
ttctggaaatgcgagaaatgctcgaagagtttctgcgaaacatgcaacatcttcatccat
gatgttcttttcaactgcccgggatgtgaaaataataaggttgtattatctaattga
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