Eumetopias jubatus (Steller sea lion): 114224116
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Entry
114224116 CDS
T07240
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
eju
Eumetopias jubatus (Steller sea lion)
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eju04121
]
114224116 (PDZRN4)
Enzymes [BR:
eju01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114224116 (PDZRN4)
Ubiquitin system [BR:
eju04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
114224116 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-rbx1
Sina_ZnF
U-box
zf-RING_6
Tricorn_PDZ
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
114224116
NCBI-ProteinID:
XP_027978966
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MGFALERFAEAVDPDFKCKLCDQVLEEPLCTPCGHVFCASCLLPWVARRRRCPLQCQPLA
PGKLYRVLPLRSLIQKLRIQCDYRARGCGRSVRLHELAAHVERCAFGPARRRQRDCVSGP
GGRGGVDVPARGGCGTAPGPGRGGGGGARGGPPGVHGGSGRGPGPLVLAWSRREKALLAQ
LWALQGEVQLTARRYQEKFAQYMAHVRNFARDLGGGRGPDGEHKPLTIVLERENDTLGFN
IIGGRPNQNNKEEKSAEGIYVSKILENGPADRADGLEIHDKIIEVNGKDLSKATHEEAVE
AFRNAKEPIVVQVLRRTPLSKPAYGTVPAVHLMHASTQTDITFEHIMALAKLRPPTPPVP
DICPFLLSDSCHSLHPMEHEFYEDNEYLSSLPADADRAEDFEYEEVELCRVSSQEKLGLT
VCYRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSSDECK
RIVLLVARPEIQLDEGWLEDERNEFLEELNLEMLEEQHNEAMQCTANEVEQPKKQEEEEG
TTDTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNSTSLKSTRELGQSQDTLGS
VELQCNESFVSGEYIDSDCIGNPDEECERFRQLLELKCKIRNPGEYDLYYSSSTIECHQG
EQEGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSMDMP
RGKLDDIIEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRVINLTNKKNLRSTMA
ANQSSSGQSSKESTSTKAKTMEQDCSVEGKEKISESNKLSDQEKTSSEHIPYLSPYHSSS
YRYANIPAHARHYQSYMQLIQQKSAVEYAQSQVSLVSMCKESQKCSEPKMEWKVKIRSDG
TRYITKRPVRDRILRERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQR
RRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHG
AKSPDGTRVHNAFLSVTTV
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgcttcgccgaagcggtggacccggatttcaagtgcaagctg
tgcgaccaggtgctggaggagcccctgtgcacgccgtgcgggcacgtcttctgcgccagc
tgcctgctgccctgggtggcgcggcggcgccggtgcccgctgcagtgccagcccctggcg
ccgggcaagctgtaccgggtgctgcctctgcgcagcctcatccagaagctgcgcatccag
tgcgactaccgcgcccgcggctgcggccgctcggtccggctccacgagctggcggcgcac
gtcgagcgctgcgccttcggtcctgcccgccgccgccagcgggactgcgtctcggggccc
ggcggccgcggcggcgtggacgtacccgcgcgggggggctgcggaacggcgccggggccc
ggccggggcgggggcgggggcgcgcgcgggggaccgccgggcgtccacggcgggagcggg
cgggggcccggaccgctagtcctcgcctggagtcggcgcgagaaggcgctgctggcgcag
ctctgggcgctgcagggcgaggtgcagctcacggcccgcaggtaccaagagaagttcgcc
cagtacatggctcacgtccgcaacttcgccagagacctgggcggcggccgcggcccggat
ggagaacataagccactcaccatcgtgttagaaagagaaaatgacacgttgggattcaat
attataggaggtcgaccaaatcagaataataaggaagaaaaatcagcggaaggaatttat
gtttcaaaaattttggaaaatggacctgccgacagagcagatggcctggagattcatgac
aaaatcattgaggtcaatgggaaggatctctcaaaggccacccatgaagaggccgtggaa
gcttttcgaaatgccaaggagcccattgtggtccaggtgctaagacgaacaccgctcagt
aaaccagcctatggaacggtcccagcagtgcatctcatgcacgccagcactcagaccgac
atcaccttcgaacacatcatggctctggccaaacttcggccaccgacccctccagtgcca
gacatctgtccattcctgctctcagacagctgccactctcttcatccgatggagcatgaa
ttttatgaggacaatgagtatctttccagcttgcctgctgatgcagacagagcagaggac
tttgaatatgaggaggtcgagctgtgtcgtgttagtagtcaagagaagctgggcctgaca
gtctgttacagaacggatgatgaagaagacacaggcatttatgtcagcgaggtagatcca
aatagcatcgctgccaaagacggccgaattcgagaaggggatcggattttgcaaataaat
ggggaagatgtccagaatcgagaagaagcagtggcgttgctgtctagtgatgagtgcaag
agaatcgtgctgcttgtcgcaaggccagagattcagctggatgaaggctggttggaagat
gaaaggaacgaattcttagaggagttaaacctggagatgctggaagaacagcataatgaa
gcgatgcagtgcacggccaatgaggtggagcagccaaaaaaacaagaagaagaggaaggc
acaacagacacggcaacatcgtcctccaacaaccatgagaaggacagtggggtggggcgc
acggatgaaagcttgcggaatgatgagagctcagagcaggagaatgcagctgaggatccc
aacagcacatctttgaagagcacgagagagctggggcagagccaagacactctaggaagc
gttgaacttcagtgcaatgagagcttcgtgtctggcgaatacattgactctgactgcatt
ggcaacccagacgaggagtgtgaaagattcagacagctcttggagctcaaatgcaagatt
cgaaaccctggagagtatgacctgtattactcgagcagcacaatagaatgccatcagggg
gaacaagaaggtgtggagcacgagctacagttgcttaatgaagaactaagaaacattgaa
ctggagtgccaaaatatcatgcaggctcacaggctccagaaggtgacagaccagtatgga
gacatctgggctttgcatgatggaggattccggaattataacaccagcatggatatgcca
cggggaaaactagatgacatcatcgaacacccagagaagtcggacaaggacagttctagt
gcttacaacacagcagaaagctgcagaagcaccccactcactgtggaccgttcccctgac
agctcccttccaagagtgatcaacctcaccaataagaaaaacctgagaagcacaatggcc
gccaatcagtcttcttccggacagagcagtaaagagtcaacctccaccaaagccaaaacc
atggaacaggactgcagcgtggagggcaaggagaagatttcagaaagcaacaagctttct
gatcaggagaaaaccagcagtgaacacatcccttacctctctccttaccacagctcctca
tatagatatgcaaatatcccagcgcatgcccggcattatcaaagctacatgcagttaatt
caacagaaatctgcagtcgagtatgctcagagccaggtgagtttagtgagcatgtgcaag
gagtctcagaagtgttcagaacccaagatggaatggaaggtgaaaatcaggagtgacggg
acacggtacataacaaagagaccagtgcgagaccggattctgagggaacgtgccttaaag
atcaaggaggagcgcagtggcatgacgacggatgatgacaccatgagcgagatgaaaatg
ggccgctactggagcaaagaggagagaaagcagcacctggttcgggccaaagagcagcgt
aggcgccgggagtttatgatgcggagccgcttggagtgtcttaaggagagcccccagagt
ggcagcgagggcaagaaggagatcaacatcattgaactgagtcacaaaaagatgatgaaa
aaaagaaacaagaaaattttggacaactggatgacaatccaagaactgatgacccacggg
gccaagtctcctgatggcacacgagttcataatgccttcttgtcagtcaccactgtatga
DBGET
integrated database retrieval system
