Eutypa lata: UCREL1_10106
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Entry
UCREL1_10106 CDS
T03103
Name
(GenBank) putative dna ligase i protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ela
Eutypa lata
Pathway
ela03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
UCREL1_10106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ela03400
]
UCREL1_10106
Enzymes [BR:
ela01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
UCREL1_10106
DNA repair and recombination proteins [BR:
ela03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
UCREL1_10106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
LIG3_BRCT
Motif
Other DBs
NCBI-ProteinID:
EMR62967
UniProt:
M7SFL6
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MVDRLNKSSQSNDKEYWIEEKLDGERMQLHMMEDDNLPGGKRFCFYSRKAKDYTYLYGES
FYDESALTRFIKNAFDPGVRNIILDGEMVTWDAESDKIMKFGTLKTAALSERHNPTDDGH
RPVFRAFDILFLNDQPLTQYTLRDRRNALEKAVLGEPRRLEVHGYTKATTPDVIEPLLRK
VVAEAGEGLVLKNPLSAYQLNARNDDWVKVKPEYMDDWGENFDCVIIGGYFGSGHRGGRL
SSFLCGLRATENDIMAGADPEKCYSFCKVGGGFSTEDFANIRHYTDGKWTPWDSSRPPTK
YIELGGTGRDRQAEKPDVWIRPSKSVVISVKAASIGASNNFAKNITLRFPRFRSLRSDKR
WDQAMDYDEFLAIGRRNETKMKEKQMEIEKKKKGRTAKRAKKEVVIVGQDTSNAVAEFAP
RPTATSSTKIFEGLEFCVLTECTAPVKKTKAQLEGMIKANGGKISQRANPNSEQLLLADK
KVIKVASLIKAGERDGTDVDIIRPRWVLDCLAQQQQQQQQQDAEFLLPFESAHLFHASDA
MGALARENTDMYGDSYARDMSLAELKEILDNMPKKEKGLEPVFDKDAFLDQLGDQGHELG
PLKGHIFRKKTVHLAVAGGVPVFMALKLSNWIKFGGGWVSEELEDRSVTHVVILSADIDG
ASEREKAAEVRSAVSARSPLPRIVTRQWVEECWKNSTLLNEERFEPL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacaggctcaacaagtctagccagtcgaatgataaggaatactggatagaagag
aaactggacggcgaacgaatgcagctacacatgatggaagatgacaacctgccaggtggg
aagagattctgtttttattcaagaaaggctaaagactacacatatctgtatggcgaaagt
ttctacgatgaaagtgcgctcacacgttttatcaagaacgcattcgatcccggtgttcgt
aatatcattctcgatggcgagatggttacatgggatgctgagtccgataagatcatgaaa
ttcgggactcttaagaccgcagctctttcagaacggcacaaccccacagatgacggacat
aggccggtgtttcgagcctttgacattctcttcctgaacgaccagccgttgacgcagtac
accctgcgagataggcgcaatgccctcgagaaggctgtcttgggggagccgcggcgactt
gaggtacatggatacactaaggctacgacgccagatgtgatcgagccattactacgtaaa
gtggtcgcagaagcgggcgagggccttgttctgaagaatcccctctctgcgtatcagctc
aacgcgcgcaatgatgactgggtaaaggttaagcctgagtacatggacgactggggtgag
aatttcgactgtgtgatcatcggtggttatttcgggtctggccatcgtggtgggcgtttg
tcgtcgttcctgtgcggacttcgcgcaacagagaacgacataatggctggcgcggacccg
gagaagtgctacagtttctgcaaagtcggcggtggcttctctactgaagacttcgccaac
atccggcactacacggatggcaagtggacgccctgggactcgagccggccgccgaccaag
tacatcgagcttggcggaaccggaagagacaggcaggccgagaagcccgacgtctggatc
cgtcccagcaagtccgtcgtcatctccgtcaaggcggccagcataggagcgtccaacaac
ttcgccaagaacataacgttacggtttccccggttccggtccctcaggtccgacaaacgg
tgggatcaagccatggactacgatgagttcctagcgatcggtcggcggaacgagacaaag
atgaaggagaagcagatggaaatcgagaagaagaagaagggccggacggccaagcgcgcc
aagaaggaggttgtcatcgttggccaggatactagtaacgcggttgcagaattcgcgccg
cggccgacagcgacgtcatcgaccaagatcttcgagggcctagagttctgcgtgctcacc
gaatgcaccgcgcccgtcaaaaagaccaaggcgcagctcgaaggcatgatcaaggcgaac
ggcggcaagatctcgcagcgtgcgaacccgaacagcgagcagctgctgctcgccgataag
aaggtcatcaaggtggccagcttgatcaaggcgggcgagagggatggaacagacgtagat
atcatccgcccgcggtgggtgctcgactgtctcgcacagcagcagcagcagcagcagcaa
caagacgcagaattcctactaccgttcgagagcgcccacctgttccacgccagcgacgcc
atgggcgcgctcgcgcgagagaacacggatatgtatggcgacagctacgcgcgggatatg
agcctggcagaactaaaggagatcctcgacaacatgcccaagaaggagaaggggctagaa
cccgttttcgacaaggacgcgttcctcgaccagctgggcgaccagggccacgagctagga
ccactgaagggtcatatttttagaaagaagactgtccacctcgccgtcgccggtggtgtt
ccggtgttcatggccctcaagttgagcaactggatcaagtttggcgggggttgggtgtct
gaggagctcgaggataggtccgtcacgcacgtggtcatactgagcgctgatatcgatggg
gctagcgagagggagaaggcggccgaggtgaggtcagccgtcagcgcccgcagcccgcta
ccaaggatcgtcacccggcagtgggttgaggagtgttggaagaacagcacacttttgaat
gaggagagattcgagcctctctag
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integrated database retrieval system
