Eutypa lata: UCREL1_4512
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Entry
UCREL1_4512 CDS
T03103
Name
(GenBank) putative tho complex subunit protein
KO
K12878
THO complex subunit 1
Organism
ela
Eutypa lata
Pathway
ela03013
Nucleocytoplasmic transport
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_4512
09122 Translation
03013 Nucleocytoplasmic transport
UCREL1_4512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_4512
03041 Spliceosome [BR:
ela03041
]
UCREL1_4512
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
UCREL1_4512
Spliceosome [BR:
ela03041
]
Complex C
Other components
EJC/TREX
UCREL1_4512
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
UCREL1_4512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
MMR_HSR1
AAA_18
ABC_tran
AAA_22
RsgA_GTPase
cobW
nSTAND3
AAA_29
T2SSE
AAA_28
AAA_33
Adeno_IVa2
Zeta_toxin
AAA_16
AAA_7
TsaE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
EMR68482
UniProt:
M7SW35
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MPLSKPQHEISSASTTIDSPEFVQVWNLFDILSILSDNEQCDPALLFWLVEELLDSQTIE
GCRTVFDFLESRRERITAKNFQPKKLVILRACNELLRRLSRAEDTAFCGRVFIFMFQSFP
LHDRSSVNLRGEYHVENITAFEEAPANGEDEPDKMEVDAEPETDKGKGEKDSKSTTKAVS
FDAKNKPGPEKPLDMSALYPVFWSLQYSFSQPMTLLDGAQFTKFKKGMDVTLSAFETVDK
LQKTTKTTDETKILPQKRKSAEATEERDGTLIIIEFLLSLTPKAKAKLANIKQPNKAVVY
NEHVLGDDDQAKWTRAMKERITSYLQAGPDGYFFFRIVDSVLSRDKGWVFWKAESCPTIE
KPAVPPVEYTEAMANVRRLATNKRLRPTPMGSMSLDFLKGEDRASALERLKDPARWRLPD
LQVFKEKIAADDLDMDFANSEKEKAQLVESKASKTWRALRIARGSRLATFDKIEDWQNVE
PIFQEQPESEEEAEDDEGPKGARPDDKRPIIFSGPTGAGKSTLIRMLLERQKGVFGKVIQ
HTTRSPQEGEVDGQDYHFVDSKTFNTILDGDYFLEFRSVDGVDYGTNRKSADALVESNKI
PLIVLDREGCDMAKANGYSARFIHIATPSPDYIVSRLEKDGKLAEDKIQEAKENAIADIE
HAKNDDRFYDTVITNDDLDTAYETLEKIIYGASLKTNGVGQNNASIGEDVVMEDTLNGET
SSPKETTEVAEAQPEASS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgccgttatcgaaaccgcagcacgagatatcttcagccagcacgaccattgattcaccc
gaattcgtccaagtctggaatcttttcgacatcctctctatcttgtcggacaacgaacaa
tgcgatccggcattgctcttttggctcgtagaggagcttctcgacagccagaccattgaa
ggatgtcgcaccgtcttcgatttcctcgagtcgcgaagagaaagaataaccgccaagaat
tttcagcctaagaagctggtcatactgagagcttgtaatgaactgctccgtcgattatca
cgggctgaggacacagctttctgcggccgggtcttcatcttcatgttccaaagtttccca
ctccatgaccgcagctctgtcaatctacgaggagagtaccatgtcgagaatatcaccgcg
ttcgaagaagccccggccaacggcgaagacgaacccgacaagatggaagtagacgcagaa
ccggagactgacaagggcaaaggcgagaaagactccaagtctactactaaagccgtatca
tttgacgccaagaacaaacctggtcccgaaaagcccctagatatgagtgctttgtatcct
gttttctggtcgcttcagtattctttcagccagcctatgactctgttagatggtgcccaa
ttcacgaaattcaagaagggcatggatgtcactttgtcagcctttgagacggtcgacaag
cttcagaagactaccaagaccaccgatgaaaccaaaatactcccccagaaacggaaaagt
gcagaagcaaccgaagagcgagatggcaccttaatcattattgaattcctactatccttg
acccccaaggccaaagccaaactcgccaatataaagcaaccaaataaggcagtagtatac
aacgagcatgtccttggagacgatgatcaggcgaaatggacccgggctatgaaagagagg
atcacaagctaccttcaagcgggacccgacggttactttttcttcaggattgttgatagt
gtcctttccagagacaagggctgggttttctggaaggctgaaagctgccctaccatcgag
aagcctgccgttcctcctgtcgaatataccgaggccatggctaatgttaggcgtttggcg
actaataagaggctgaggccgacgccaatgggctccatgtctctggatttcttgaagggg
gaagatagagcgtccgctctagagcgactgaaagaccctgcgcgatggaggcttccggat
ctgcaagtattcaaggagaagatcgccgcggacgatctcgatatggactttgcgaactcc
gaaaaggagaaggcgcaactagttgagtccaaagcaagtaaaacttggagggccctacga
attgctcggggaagcagactggccacgttcgacaagattgaggactggcaaaatgtagag
cctatcttccaggaacagccagagtccgaagaggaggctgaagatgacgaaggcccgaag
ggtgcgcgtcccgatgataaacggcctattatcttctccgggcccaccggcgctggcaaa
tccacgttaatacgcatgctcctagagaggcagaagggcgtgtttggcaaagttatccag
catactacacgcagccctcaggaaggcgaggtcgatggtcaggattatcacttcgtcgat
tcgaaaaccttcaacacgatacttgatggggattacttcttagagttcagaagtgtagat
ggtgttgattacggcacgaaccggaagtccgctgacgcgctagtggagtccaataagatc
cccttaatagtactagatcgcgagggctgcgacatggccaaagccaacggctactctgcg
cggttcatacacatcgcaacgcccagcccggattacatagtatcccggctggagaaggac
ggcaagctagcggaagacaagattcaagaggcaaaggagaatgccatcgcagatatcgag
cacgcgaagaatgatgatcgcttctacgataccgtcataacgaacgacgaccttgataca
gcatacgagacccttgagaagattatttacggcgcatcgctcaagaccaacggagtgggc
caaaacaacgcatccataggagaagacgtggttatggaagatacgctgaacggggagacg
agttctccaaaggaaaccaccgaggtggcggaggcccagccggaggcttcttcatag
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integrated database retrieval system
