Eutypa lata: UCREL1_4802
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Entry
UCREL1_4802 CDS
T03103
Name
(GenBank) putative nonsense-mediated mrna decay protein
KO
K14328
regulator of nonsense transcripts 3
Organism
ela
Eutypa lata
Pathway
ela03013
Nucleocytoplasmic transport
ela03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
UCREL1_4802
03015 mRNA surveillance pathway
UCREL1_4802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ela03019
]
UCREL1_4802
Messenger RNA biogenesis [BR:
ela03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
UCREL1_4802
mRNA cycle factors
P-body specific factors
UCREL1_4802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-ProteinID:
EMR68189
UniProt:
M7SP56
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MVQSSTWEDAKRTMNDSALVGPPYVEVAQFQKIPTAKKRTDPRQGTIDQDPEFQAFLQSL
TQPTPTKEADNEQAPEETTPEDTKVTITPLVQYLKEKKANKAREAANAKSSKHGRHESQG
GKSKGATEDSSKKKSKDAKADKSEKSSEKDKEKAKEPVKLLTKKAAAQEAAEAAKVVAAQ
ATASKSAEESAQPKSRRAGIAAAAKILQRDLGLSPGSAHRRARQDAAKAEVVSKADTGKE
TKETKATPSAAPAAETSTSPASPSTPTAPKASASEGSRRSRNKASKQNTSKEDAKGKGSE
TSGTAAKPLPQPTPIILKRKDNTASSTPASPAPPAATLAPSTSTPTPPTGPKAATGKSTA
ASKSGSSQKKGGGSSQQPSVTAGATRAFIKHANPSQGITEALLKQVMETFGPVTFVEIDK
RKGFAYVDFGDHDALIKGVAASPVTVAQGAVQVLERKEIVKKTTAAAPQQQNAADKEKEK
EKEKDKDKVKEKEKGKDKDRASTSEGQGQDQTQTSTQSERPKRGGRGRGRKGGGGGGGGT
QKEASAAATVATPGEAASSSSKAAPSAAPANAPS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaagttctacatgggaggatgcgaaacgaaccatgaacgactccgctctggta
gggccgccgtatgtcgaagttgcccagtttcagaaaatcccaactgcaaagaaacgcaca
gaccccagacaaggtacaatcgaccaagaccctgagttccaggctttcctccagtcactc
acacaacctacccctacaaaggaggcagacaacgaacaagccccagaagaaactaccccg
gaagacacaaaagtcactattacgccactcgttcagtatcttaaggagaagaaggcgaat
aaggcaagggaggccgcaaatgcgaagagttctaaacatggtcggcacgaatctcagggt
ggtaaatctaagggtgctacagaggattcgagtaagaagaagagcaaggatgccaaagcg
gataaatccgagaagtcgagcgagaaggacaaagagaaggcgaaagagcccgtcaagctc
ttgactaagaaagctgcagctcaggaggccgctgaggctgcgaaggttgtggctgcacag
gctaccgcaagcaagtctgctgaagaatccgcgcaaccgaagagtcgacgcgccggcatc
gcagctgctgctaagattttacagcgtgacctaggtctaagccctggcagtgctcatagg
agagctcgccaagacgctgctaaagcggaagtagtatccaaagctgatactgggaaagaa
actaaagagactaaggcaactccatctgccgcgccagctgctgagacatcgacttctccg
gcatctccatctacacctacggcgccgaaggcttcagcaagcgaagggtctcggagatcc
cgcaataaagctagcaagcagaacacttcaaaagaggatgcgaagggcaaaggtagtgaa
acgtcgggaacagctgccaagccgttgcctcaacctacaccaatcatccttaagcgcaag
gataatactgctagctctactccggcatcaccggccccaccggcggcaactctagcgcct
tcgacatcgacgccaacaccaccgaccggaccaaaggcagctacagggaaatccacagca
gcctccaaatcaggatcttcgcagaagaaaggaggaggttcatcccagcagccctcggtg
acagcaggcgcaacgcgcgccttcataaagcacgcgaacccctcgcagggcattactgaa
gccctgctcaagcaggtcatggagaccttcgggcccgtcacgtttgtcgagatcgacaag
cgcaagggcttcgcctacgtcgacttcggagaccacgatgccctcatcaagggcgttgct
gctagccctgttacggtcgcccagggcgccgttcaggtgcttgagaggaaggagattgtt
aagaagactacggcggcagctcctcaacagcagaatgcggctgataaggagaaggagaag
gagaaggagaaagacaaggacaaagtgaaagaaaaggagaaaggcaaagataaagataga
gcgagtacttcggagggccagggccaggaccagacacagacatcgactcagagtgagcgc
ccgaaacgcggagggcgcggtcgtggacggaaaggtggaggtggtggtggtggtgggacc
cagaaagaagcgtctgctgctgctactgttgctacgcctggagaagctgcctcgtcttcg
tctaaggcagcgccgtcggctgcaccggccaatgcgcccagttga
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