Escherichia coli clone D i14: i14_2062
Help
Entry
i14_2062 CDS
T02003
Symbol
yebU
Name
(GenBank) rRNA (cytosine-C(5)-)-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
elc
Escherichia coli clone D i14
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elc03009
]
i14_2062 (yebU)
Enzymes [BR:
elc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
i14_2062 (yebU)
Ribosome biogenesis [BR:
elc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
i14_2062 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
PCMT
Methyltransf_25
TRM
FtsJ
NSUN5_fdxn-like
TruB-C_2
Ubie_methyltran
GCD14
Motif
Other DBs
NCBI-ProteinID:
AER89550
LinkDB
All DBs
Position
2014336..2015781
Genome browser
AA seq
481 aa
AA seq
DB search
MLVAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKTSVADFLQLTA
PYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAP
QRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGR
VFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRP
GGTLVYSTCTLNREENEAVCLWLKETYHDAVEFLPLGDLFPGANKALTEDGFLHVFPQIY
DCEGFFVARLRKTQAIPVLPAPKYKVGNFPFSPVKDREAGQIRQAAASVGLNWDENLRLW
QRDKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALASPDNVNAFELTP
QEAEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTGN
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtggcccaacacaccgtttatttcccggacgcctttctgacacaaatgcgcgaa
gcgatgccttcgacgctctcttttgatgattttcttgccgcctgtcagcgcccgttgcgc
cgcagcattcgcgttaatacgctgaaaacctccgttgctgatttcctgcaattaactgca
ccttatggctggacgcttacgccaattccgtggtgtgaagaaggtttctggattgaacgc
gacaatgaagatgcattgccgttgggtagtaccgccgagcatttaagcggcctgttttat
attcaggaagccagttcaatgttgcctgttgccgccttgtttgctgacggtaatgcacca
cagcgggtgatggatgtcgctgctgcaccaggttccaaaacgacgcaaattgctgcgcgg
atgaataacgaaggggcaatccttgccaatgagttttccgccagtcgggtaaaagtgtta
catgccaatatcagccgctgtggcatcagtaatgttgcgctcacgcattttgatggccgc
gtatttggtgcggcagtgccagaaatgttcgatgccattttgctggacgctccctgctcc
ggcgaaggcgtggtgcgtaaagatcccgatgcgctaaaaaactggtcaccagaaagcaat
caggaaatcgcagcgacccaacgggagctgatcgacagcgcctttcatgcattacgtcct
ggcggtacgctggtttactcgacctgtaccttaaaccgggaagaaaacgaagccgtttgc
ctgtggctgaaagagacttaccacgacgcagtagagtttttaccgcttggcgatctcttc
cctggtgcaaataaggcgctgaccgaagacggctttttgcatgttttcccacaaatttac
gactgcgaaggcttcttcgttgctcgtctgcgtaaaactcaggcgatccccgtcttaccc
gccccaaaatacaaagtgggcaatttcccgtttagcccggtgaaagatcgcgaagccggt
caaattcgtcaggcggctgcaagtgttggcttaaactgggatgaaaacctgcgactctgg
cagcgtgacaaagaactgtggttgttcccggtaggcattgaagccctgatcggtaaagtc
cgattttctcgcttggggattaaacttgccgaaacgcacaacaaaggttatcgctggcag
catgaagccgttattgcccttgcctcccccgacaatgtgaacgcttttgaactgacaccg
caggaagcggaagagtggtatcgcgggcgcgatgtttacccgcaagccgcgccagtggcg
gatgatgtattggttactttccagcatcagccgattggtttagccaaacggattggttca
cgactgaaaaacagctacccgcgtgaactggtgcgcgacgggaaactttttaccggtaac
gcctga
DBGET
integrated database retrieval system
