Escherichia coli clone D i14: i14_4513
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Entry
i14_4513 CDS
T02003
Symbol
oxyR
Name
(GenBank) DNA-binding transcriptional regulator OxyR
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
elc
Escherichia coli clone D i14
Pathway
elc02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
i14_4513 (oxyR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elc03000
]
i14_4513 (oxyR)
Transcription factors [BR:
elc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
i14_4513 (oxyR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AER91950
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Position
4510053..4511015
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AA seq
320 aa
AA seq
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MLPIAANYRGNGGWIMNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGV
MLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYL
LPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPM
LLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLE
TLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQL
AEAIRARMDGHFDKVLKQAV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgctacctatcgccgcgaactatcgtggcaatggaggatggataatgaatattcgtgat
cttgagtacctggtggcattggccgaacaccgccattttcggcgtgcggcagattcctgc
cacgttagccagccgacgcttagcgggcaaattcgtaagctggaagatgagttgggcgtg
atgttgctggagcggaccagccgtaaagtgttgttcacccaggcgggaatgctgctggtg
gatcaggcgcgtaccgtactgcgtgaggtgaaagtccttaaagagatggcaagccagcag
ggcgagacgatgtccgggccgctgcatattggtttgattcccacggttggaccgtacctg
ctaccgcatattatcccgatgctgcaccagacctttccaaagctggaaatgtatctgcat
gaagcacagacccaccagttactggcgcaactggacagcggcaaactcgattgcgtgatc
ctcgcgctggtgaaagagagcgaagcattcattgaagtgccgttgtttgatgagccaatg
ttgctggctatctatgaagaccacccgtgggcgaaccgcgaatgtgtaccgatggccgat
ctggcaggggaaaaactgctgatgctggaagatggtcactgtttgcgcgatcaggcaatg
ggtttctgttttgaagccggggcggatgaagatacacacttccgcgcgaccagcctggaa
actctgcgcaacatggtggcggcaggtagcgggatcactttactgcctgcgctggctgtg
ccgccggaacgcaaacgcgatggggttgtttatctgccgtgcattaagccggaaccacgc
cgcactattggcctggtttatcgtcctggctcaccgctgcgcagccgctatgagcagctg
gcagaggccatccgcgcaagaatggatggccatttcgataaagtgttaaaacaggcggtt
taa
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