KEGG   Escherichia coli LF82: LF82_0303
Entry
LF82_0303         CDS       T00854                                 
Symbol
cho
Name
(GenBank) excinuclease cho
  KO
K05984  excinuclease Cho [EC:3.1.25.-]
Organism
elf  Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:elf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elf03400]
    LF82_0303 (cho)
DNA repair and recombination proteins [BR:elf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LF82_0303 (cho)
SSDB
Motif
Pfam: GIY-YIG
Other DBs
NCBI-ProteinID: CAP76235
LinkDB
Position
1794253..1795140
AA seq 295 aa
MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSINIRSR
VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ
LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA
CFRSALKRCAGACCGKESHDDHALRLRQSLERLRVVCWPWKGAVALKEQHPEMTQYHIIQ
NWLWLGAVNSLKEATTLIRAPAGFDHDGYKILCKPLLSGNYEITELDPVNDQQAS
NT seq 888 nt   +upstreamnt  +downstreamnt
gtggtacggcgtttaacttctccgcggctcgaatttgaagctgcggcaatttatgaatat
cccgaacatttacgttcattccttaatgacttacccacccgaccaggggtgtatctgttt
catggcgaaagtgacaccatgccgctctatatcggcaaaagcattaacatccgcagccgc
gtcctttctcatttacgtaccccggatgaagccgccatgctacggcaatcccgacgcatc
agctggatatgtaccgccggtgaaatcggcgctctgctccttgaagcgcgattaatcaaa
gaacaacagccactgtttaataaacgcttgcggcgcaatcgccagctctgtgccctgcaa
ttaaatgaaaagcgcgtcgatgtggtgtatgccaaagaggtggatttttcacgagccccc
aacctgtttggcctgtttgccaataggcgcgcagctttgcaagcattgcagaccatcgct
gatgaacaaaaactttgttatggcctgttgggactggagccgttaagtcgcggtcgtgca
tgttttcgttcagcgctaaaacgttgcgccggagcatgctgcggtaaagagagccatgac
gatcatgcgctacgtttgcgccagtctctggaacgtttacgagtcgtttgttggccgtgg
aaaggtgcggtggcgctgaaagaacagcacccggaaatgactcaatatcatattattcaa
aactggctgtggctgggggcggttaattcgctgaaagaagcgacaacgttaattcgggca
cccgccgggtttgatcacgacggttataaaattctttgtaagccgctgctttccggtaac
tatgaaattactgaacttgatccggtgaatgaccagcaagccagttga

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