Escherichia coli LF82: LF82_0303
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Entry
LF82_0303 CDS
T00854
Symbol
cho
Name
(GenBank) excinuclease cho
KO
K05984
excinuclease Cho [EC:3.1.25.-]
Organism
elf
Escherichia coli LF82
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elf03400
]
LF82_0303 (cho)
DNA repair and recombination proteins [BR:
elf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LF82_0303 (cho)
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GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
CAP76235
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Position
1794253..1795140
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AA seq
295 aa
AA seq
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MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSINIRSR
VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ
LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA
CFRSALKRCAGACCGKESHDDHALRLRQSLERLRVVCWPWKGAVALKEQHPEMTQYHIIQ
NWLWLGAVNSLKEATTLIRAPAGFDHDGYKILCKPLLSGNYEITELDPVNDQQAS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtggtacggcgtttaacttctccgcggctcgaatttgaagctgcggcaatttatgaatat
cccgaacatttacgttcattccttaatgacttacccacccgaccaggggtgtatctgttt
catggcgaaagtgacaccatgccgctctatatcggcaaaagcattaacatccgcagccgc
gtcctttctcatttacgtaccccggatgaagccgccatgctacggcaatcccgacgcatc
agctggatatgtaccgccggtgaaatcggcgctctgctccttgaagcgcgattaatcaaa
gaacaacagccactgtttaataaacgcttgcggcgcaatcgccagctctgtgccctgcaa
ttaaatgaaaagcgcgtcgatgtggtgtatgccaaagaggtggatttttcacgagccccc
aacctgtttggcctgtttgccaataggcgcgcagctttgcaagcattgcagaccatcgct
gatgaacaaaaactttgttatggcctgttgggactggagccgttaagtcgcggtcgtgca
tgttttcgttcagcgctaaaacgttgcgccggagcatgctgcggtaaagagagccatgac
gatcatgcgctacgtttgcgccagtctctggaacgtttacgagtcgtttgttggccgtgg
aaaggtgcggtggcgctgaaagaacagcacccggaaatgactcaatatcatattattcaa
aactggctgtggctgggggcggttaattcgctgaaagaagcgacaacgttaattcgggca
cccgccgggtttgatcacgacggttataaaattctttgtaagccgctgctttccggtaac
tatgaaattactgaacttgatccggtgaatgaccagcaagccagttga
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