Escherichia coli LF82: LF82_2789
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Entry
LF82_2789 CDS
T00854
Symbol
ydbK
Name
(GenBank) pyruvate-flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
elf
Escherichia coli LF82
Pathway
elf00010
Glycolysis / Gluconeogenesis
elf00020
Citrate cycle (TCA cycle)
elf00620
Pyruvate metabolism
elf00650
Butanoate metabolism
elf01100
Metabolic pathways
elf01110
Biosynthesis of secondary metabolites
elf01120
Microbial metabolism in diverse environments
elf01200
Carbon metabolism
elf01210
2-Oxocarboxylic acid metabolism
Module
elf_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
elf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LF82_2789 (ydbK)
00020 Citrate cycle (TCA cycle)
LF82_2789 (ydbK)
00620 Pyruvate metabolism
LF82_2789 (ydbK)
00650 Butanoate metabolism
LF82_2789 (ydbK)
Enzymes [BR:
elf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
LF82_2789 (ydbK)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_16
Fer4
Fer4_21
Fer4_10
Fer4_9
Fer4_2
Fer4_8
Fer4_6
Fer4_17
Fer4_18
Fer4_4
Transketolase_C
Fer4_15
FlgM
Motif
Other DBs
NCBI-ProteinID:
CAP75892
LinkDB
All DBs
Position
complement(1425572..1429096)
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AA seq
1174 aa
AA seq
DB search
MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSE
AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIF
GDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSRVPFIHFFDGFRTSHEINKIV
PLADDTILELMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE
QAMNDFAAATGRQYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRL
YRPFSAKHLLQALPGSVRNVAVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVI
GGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDVTNLSLPLPENTLPNSAKLEA
LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL
ISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSAAEVWSRLPQEVQAVLNQKKARF
YVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVER
NWQALALARESVEEVPLQPVNPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALP
PDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPAS
LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE
KINYDFFLNLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML
IANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRL
LNQFADKIPTELLTALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLI
GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK
ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL
SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQP
EVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgattactattgacggtaatggcgcggttgcttcggtggcgtttcgcaccagtgaagtt
atcgccatctaccctattacccccagttccacgatggcagaacaggctgatgcatgggcc
ggaaacggcttgaaaaacgtttggggagacacaccacgcgtggttgaaatgcagtcggaa
gcgggtgctatcgctaccgtgcatggtgctttgcaaactggtgccctctcaacatcgttt
acgtcatcgcagggtttgctgctgatgatcccgacgctgtacaaactggcaggcgaactc
acaccgtttgtcctgcatgttgcggcacgtaccgttgccacacatgcactctctattttt
ggcgatcattccgacgttatggcggtgcgccagacgggttgcgcgatgttgtgtgcagca
aacgtccaggaagcgcaagactttgctctcatttcgcacatcgcgacgctgaaaagccgc
gtgccatttattcatttctttgatggtttccgcacatcccacgaaatcaataaaattgtc
ccgctggccgatgacacgattcttgaactgatgccgcaggcagaaattgatgctcatcgc
gcccgggcactcaacccggaacatccggtgatccgcggtacgtccgccaatcctgacact
tatttccagtctcgcgaagccaccaacccatggtacaacgcagtctatgaccatgttgaa
caggcgatgaatgatttcgctgccgcgacaggtcgtcagtatcagccgtttgagtattac
gggcatccgcaagcggaacgggtgattatcctgatgggctcagccattggcacatgtgaa
gaagtggttgatgaattgctgacccgtggcgaaaaagtcggcgtgctgaaagttcgcctg
taccgccccttctccgccaaacacttgctgcaagctctgccgggatccgtgcgcaacgtg
gcggtactggacagaaccaaagagcctggcgcccaggcagaaccgctctatctggatgtg
atgaccgcactggcagaagcctttaataatggcgagcgtgaaaccctgccccgtgtcatt
ggtgggcgctatggtctttcatccaaagaatttggcccggactgtgtactggcggtattt
gccgagctcaacgcggctaaaccgaaagcgcgctttacggttggtatttacgatgatgta
accaatctgtcactgccgttgccggaaaacaccctaccaaactcggcgaaactggaagcc
ttgttttatggccttggtagtgatggcagcgtttccgcgaccaaaaacaatatcaagatt
atcggaaattccacgccgtggtacgcacagggctattttgtttacgactccaaaaaggcg
ggcggcctgacggtttctcaccttcgcgtgagcgaacagccgattcgttccgcttatctc
atttcccaggctgattttgttggctgccaccagttgcagtttatcgataaatatcagatg
gctgagcgtttaaaacctggcggcattttcctgctcaacacgccgtacagcgcagctgaa
gtgtggtcgcgcttgccgcaggaagttcaggccgtgctaaaccagaaaaaagcgcgcttc
tatgtgattaacgcggcgaaaatcgcccgcgaatgtggcctggcggcccgtattaatacc
gtcatgcagatggcttttttccatctgacgcagattctgcctggcgatagtgccctcgca
gaattgcagggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgc
aactggcaggctctggcgctggcacgtgaatccgtagaagaagttccactgcagccagtt
aatccgcatagcgccaatcgaccgccagtggtttccgatgccgctcctgatttcgtgaaa
accgtaaccgctgcgatgctcgccgggcttggcgacgccctccccgtttcggcgctgccg
ccagacggcacctggccgatgggcaccacgcgctgggaaaaacgcaatatcgccgaagag
atccccatctggaaagaggaactctgtacccaatgtaaccactgtgtcgccgcttgccca
cactcagctattcgcgcaaaagtggtaccgcctgaagcgatggaaaacgcccctgccagc
ctgcattcgctggatgtgaaatcgcgtgatatgcgcgggcagaaatatgtcttgcaggtg
gctccggaagattgcaccggttgtaacctgtgcgtcgaagtttgcccggcgaaagaccgt
cagaatccagagattaaagccatcaatatgatgtcgcgcctggaacatgtcgaagaagag
aaaatcaattacgatttcttcctcaacctgccagaaatcgaccgtagcaaactggaacgt
attgatattcgtacatcgcagctgattacaccgctgtttgaatattcaggtgcttgctcc
ggttgtggcgagacgccgtatattaaattgctgactcagctctatggcgaccggatgttg
atcgctaatgccactggctgttcttcaatatacggcggtaacctgccttcaacaccatat
accaccgatgccaacggtcgtggaccggcatgggcgaactcgctgtttgaagataacgcc
gaatttggccttggtttccgcctgacggtcgatcaacaccgtgtccgcgtgctgcgtttg
ctcaatcaatttgccgataaaatcccgacggaattactgactgcgttgaaatcagacgcc
acgccagaggttcgtcgtgaacaggttgcagctttacgccagcaactcaacgatgttgcc
gaagcacatgaactgctgcgtgacgcagatgcactggtggaaaaatcaatctggctgatt
ggtggcgatggctgggcttacgatatcggctttggcggtctggatcatgtattgagtttg
acggaaaacgtcaacattctggtgctggatacgcaatgctattccaacaccggtggtcag
gcatcgaaagcgacaccgctgggtgcagtaactaagtttggcgagcatggcaaacgtaaa
gcgcgtaaagatcttggcgtcagtatgatgatgtacggtcatgtttatgtggcgcagatt
tctctcggcgcgcagctgaaccagacggtgaaagcgattcaggaagcggaagcgtatccg
gggccatcgctgatcatcgcttatagcccatgtgaagagcatggttacgatctggcactc
agccacgatcagatgcgccaactcactgctaccggcttctggccgttatatcgcttcgat
cctcgtcgtgccgatgaaggcaaactgccgctggcgctggattcacgcccgccgtcagaa
gcactggaagaaacgttacttcacgagcagcgtttccgtcgtctgaattcgcagcagcca
gaagtggcagaacagttatggaaagatgctgcagctgatttgcaaaagcgctatgacttc
ctggcacaaatggccggaaaagcggaaaaaagcaacaccgattaa
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