Erythrobacter litoralis HTCC2594: ELI_14460
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Entry
ELI_14460 CDS
T00315
Name
(GenBank) DNA-directed RNA polymerase 140 kDa subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
eli
Erythrobacter litoralis HTCC2594
Pathway
eli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ELI_14460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eli03021
]
ELI_14460
03400 DNA repair and recombination proteins [BR:
eli03400
]
ELI_14460
Enzymes [BR:
eli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ELI_14460
Transcription machinery [BR:
eli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ELI_14460
DNA repair and recombination proteins [BR:
eli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ELI_14460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
ABC64984
UniProt:
Q2N5Q7
LinkDB
All DBs
Position
2906934..2911124
Genome browser
AA seq
1396 aa
AA seq
DB search
MASKAKNTAAAAKAEGTAKRRIRKIFGDIHEVVKMPNLIEVQRESYEQFLRSNKEIDYVS
GLEKTLRSVFPIRDFAGTAELDFVHYELEPPKYDTTECRQRGITYAAPMKVTLRLIVFEV
DQETETRSVLDIKEQDVYMGDMPLMTGNGTFIINGTERVIVSQMHRSPGVLFDHDRGKTH
SSGKLLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTALLYALGLDSEEILHFFY
NTVTWKRAGGKKGEGWKIPFEPEAWRGQKPTFALVDAKTGEEVFPANQKISPRAANKAQK
DGLKDLLLPTEEVFARYAAKDMIDEKTGRIYIEAGDEVGPDHLEALDAAGIDELELLDID
EINTGPWIRNTLKVDKAENRDEGLEAIYKVMRPGEPPTKETAEALFEGLFFDGERYDLSA
VGRVKLNMRLDLDAEDTVTTLRKEDILAVVKELVGLKDGKGDVDDIDNLGNRRVRSVGEL
LENQYRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTN
PLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLSTFA
RVNKYGFIETPYRVVKDGKVTSEVIYLSAMEEQKHTVAQASAELTEDGTFVEELISARQN
GDNLMAPSETVTLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVKAEAPW
VGTGMEETVARDSGAAITATRGGIVDQVDATRIVIRAIGDVEPGQSGVDIYTLQKFQRSN
QNTCINQRPLVKVGETVEAGDVIADGPSTDLGELALGKNTLVAFMPWNGYNYEDSILISE
RIVKDDVFTSIHIEEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVHPG
DILCGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTVVEVRVFNRHGIE
VDDRTRAIQQEEIERLRKDSQDERTILNRATYNRLRDMLLGQTASAAPKGVKKGVKIDEA
LLEGIDRHEWFKFAVADDNRQQQIEAVKSQYDEAAKGIDDKFEDRKEKLERGDELAPGVL
KMVKVFVAVKRKLQPGDKMAGRHGNKGVISRILPVEDMPFLEDGTPVDIVLNPLGVPSRM
NVGQIFETHLGFAARGLGQQVKNALEDWRAANPDPEAGKPPEAVKETLQRVYGDRYEDDI
AGRSNAEIIELASNLTAGVPMGTPVFDGAREGDVTTQLEAAGIDSSGQSVLYDGRTGEAF
DRKVTVGIIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAY
GAAYTLQEMLTVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVELSS
LTDGDEDDDGLQIAAE
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaaggcgaagaacacagcggctgcagcgaaagctgaaggcacggccaagcgg
cgtatccgcaagattttcggcgacattcacgaagtcgtgaagatgccgaacctgatcgag
gtccagcgcgagagctacgaacagttcctgcgttcgaacaaggagatcgactacgtctcc
ggcctcgagaaaacgctgcgttcggtgttcccgatccgcgacttcgccggcactgccgag
ctcgacttcgtgcattacgagctcgagccgcccaaatacgacaccaccgagtgtcgccag
cgcggcatcacctatgccgcccccatgaaggtgacgctgcgcctgatcgtcttcgaagtc
gaccaggaaaccgaaacccgttccgtcctcgatatcaaggagcaggacgtttacatgggc
gacatgccgctcatgaccgggaacggcactttcatcatcaacggtaccgagcgtgtcatc
gtgtcgcagatgcaccgttcgccgggtgtgctgttcgaccatgaccggggcaagacccac
agctcgggcaagctgctgtttgccgcacgcgtgatcccctaccgcggttcgtggctcgat
ttcgaattcgacgccaaggacatcgtcaacgtccggatcgaccgcaagcgcaagctgccg
gtcaccgcgttgctttatgcgctcggcctcgacagcgaagaaatcctgcacttcttctac
aacaccgtcacctggaagcgggccggcggcaagaagggtgaaggctggaagatcccgttc
gagcccgaagcctggcgtggccagaagccgaccttcgcactggtcgatgccaagaccggc
gaggaagtcttccccgccaaccagaagatcagcccgcgcgctgccaacaaggcgcagaag
gatggtctgaaggacctgctgctgccgaccgaagaagtgttcgcgcgctacgccgcaaag
gacatgatcgacgagaaaaccggccgcatttacatcgaggctggcgacgaagtcggcccc
gaccatctcgaagcgctcgacgctgccgggatcgatgagctggaactgctcgacatcgat
gaaatcaacaccggcccttggatccgcaacacgctcaaggtcgacaaggccgagaaccgc
gacgagggcctggaagcgatctacaaggtcatgcgtccgggcgagccgccgaccaaggaa
accgccgaagcgctgttcgaaggcctgttcttcgacggcgaacgctacgacctgtcggcc
gtcggtcgcgtcaagctcaacatgcgtctcgacttggatgccgaagacaccgtgaccacg
ctgcgcaaggaagacatccttgccgtggtcaaggaacttgtcggcctcaaggacggcaag
ggcgatgtcgacgacatcgacaacctcggcaaccgccgcgtacgttctgtcggcgagctg
ctggaaaaccagtaccgcgtcggcctgctgcgcatggaacgcgcagtgaaggagcgcatg
agctcggtcgatgtgtcgaccgtcatgcccaacgacctgatcaacgcgaagccggctgtg
gccgccgtccgcgaattcttcggctcttcgcagctgtcgcagttcatggaccagaccaac
ccgctgtcggaagtcacgcacaagcgccgcgtttcggcgcttggcccgggcggcttgacc
cgtgagcgcgcagggttcgaagtccgcgacgttcacccgacccactatggccgcatctgc
ccgatcgaaacgccggaaggcccgaacatcggcctgatcaactcgctctcgacttttgcc
cgcgtcaacaaatacggcttcatcgaaacgccgtatcgcgtcgtgaaggacggcaaggtc
accagcgaagtgatctacctgtccgccatggaagaacagaagcacacggttgcgcaggct
tcggcagagctgaccgaagacggcacattcgtggaggagctgatctctgcgcgccagaac
ggcgacaacctgatggcgccgagcgaaaccgtcacgctgatggacgtttcgcccaaacag
ctcgtctcggtcgccgcatcgcttattccgttcctggaaaacgatgacgccaaccgcgcg
ctgatgggctcgaacatgcagcgccaggccgtgccgctggtcaaggcggaagcgccctgg
gtcggcaccggcatggaagaaaccgtggcccgcgattcgggcgcggcgatcaccgccacc
cgtggcggcatcgtcgaccaggtcgacgccacgcgtatcgtgatccgcgccatcggcgat
gtcgaacccggccagtcgggcgtcgacatctacacgctgcagaagttccagcgctccaac
cagaacacctgcatcaaccagcgtccgctggtgaaggtcggtgaaacggtcgaagccggc
gacgtgatcgccgacggtccctcgaccgacctcggcgagctggcgctgggcaagaacacg
ctcgtcgcgttcatgccttggaacggctacaattacgaggactcgatcctcatctccgaa
cgcattgtgaaagacgacgtcttcacctcgatccacatcgaggaattcgaagtcatggcc
cgcgacaccaagcttggccccgaagacatcacccgcgacatcccgaatgtcggcgaggaa
gccctgcgcaacctcgacgaggcgggcatcgtttatatcggcgccgaagtgcatccgggc
gacattctgtgcggcaagatcacgccgaagggcgaaagcccgatgacgccggaagaaaag
ctgctgcgcgccatcttcggcgagaaggccagcgacgtgcgcgacacttcactccgcctc
ccgccgggcgtggccggaacggtcgtggaagtccgcgtcttcaaccgccacggtatcgaa
gtggacgaccgtacgcgtgcgatccagcaggaagagatcgagcgtctgcgcaaggacagc
caggacgaacgcacgatcctcaaccgtgcgacctacaaccgcctgcgcgacatgcttctc
ggccagacggcttcggcagcgcccaagggcgtgaagaagggcgtcaagatcgatgaagcc
ttgctcgaaggcatcgacaggcacgaatggttcaagttcgccgtcgccgatgacaaccgt
cagcagcagatcgaagcggtcaagagccagtacgacgaagccgccaagggcatcgacgac
aagttcgaagaccgtaaggagaagctggagcggggcgacgaactcgcgccgggcgtgctc
aagatggtcaaggtcttcgttgcggtgaagcgcaagctgcaaccgggcgacaagatggcc
ggtcgccacggtaacaagggtgtgatttcgcgcatccttccggtcgaggacatgccgttc
ctcgaagacgggaccccggtcgatatcgttttgaacccgctgggcgtgccgtcgcgcatg
aatgtcgggcagatcttcgaaacgcacctgggcttcgcggcgcgcgggcttggccagcag
gtcaagaacgcgctggaagactggcgcgcggccaatcccgatccggaagccggcaaaccg
ccggaagcggtcaaggaaacgctgcagagggtctatggcgatcgctacgaagacgacatc
gccgggcgcagcaatgccgagatcatcgaactcgccagcaatctgaccgccggtgtcccg
atgggcaccccggtgttcgacggtgcgcgcgagggcgatgtcaccacgcagctcgaagct
gccggtatcgactcgagcggccagtcggttctctacgatggtcgcaccggtgaggctttc
gaccgcaaggtgaccgtgggcattatctacatgctcaagctgcaccacctggtggacgac
aaaatccacgcccgttcgatcggcccctactcgctcgtcacccagcagccgctgggcggt
aaggcgcagttcggcggccagcgcttcggtgagatggaggtctgggcgctccaggcctac
ggcgcagcctacacgttgcaggaaatgctcaccgtcaagtcggacgacgtggtcggccgg
accaaggtttacgaagcgatcgtcaagggcgacgacaccttcgaagccggcattccggaa
agcttcaacgtgctcgtcaaggaaatgcgctcgctgggcctcaatgtcgaactttcgtcg
ctcaccgatggtgatgaggatgacgacggcctgcagatcgcagccgagtaa
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integrated database retrieval system
