Eubacterium limosum: B2M23_13375
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Entry
B2M23_13375 CDS
T06653
Name
(GenBank) conjugal transfer protein TraA
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
elim
Eubacterium limosum
Pathway
elim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B2M23_13375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elim03400
]
B2M23_13375
Enzymes [BR:
elim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B2M23_13375
DNA repair and recombination proteins [BR:
elim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B2M23_13375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
HHH_2
UvrD_C
HHH
nSTAND3
PIF1
PhoH
DEAD
Helicase_RecD
SLFN-g3_helicase
UvrD-helicase
AAA_22
AAA_23
T2SSE
AAA_29
5_3_exonuc
NTPase_1
HHH_3
AAA_28
AAA_12
RsgA_GTPase
DNA_pol_lambd_f
AAA_16
RNA_pol_A_CTD
AAA
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ARD66465
UniProt:
A0A317RI79
LinkDB
All DBs
Position
2844299..2846509
Genome browser
AA seq
736 aa
AA seq
DB search
METLKGTVDHIIFHNDKNGYTVADFDVDGQMVTVVGNFEELKEGEFLKLTGFWKEHQSYG
EQFQIESYALDLPTSEEGIIRYLSSGLLPGIGEKTAIEIVNHFGADTLDILDNHPDRLSE
VHGIGKKTLDKIKEVYSEQKEIRDVMIQIQEYGISSTYAMKLYKTYQSDTVRVLLDNPYQ
IIKDVRGIGFKIADQISAQLGFESQNPKRILSGISFCLQDCYSRGNTYMTEKDLIEHSAS
ILGVSREDIEFQLQELALRGDVRLEFIDDEPAYYPSALFEAEDNAALSMVRLAGAVFEMQ
EVDIPAMIAAYEEDMSIRLDNRQAEAIEAAIENGIAIITGGPGTGKTTIINGIVYIFKRL
GMKTVLAAPTGRAAKRITETTGEPAKTIHRLLEYDYSGDDDFPSFNRDEENPLEVDAIIL
DEASMIDIVLLNSLLEAIKPGTRLILVGDADQLPSVGPGNVLQDLIESNVVKVVRLDRIY
RQSEESMISINAHAINEGMMPEINNQSDFMFIRTMDPDKVLDTILDLVAWRIPEKKGFDA
MKDVQVISPIKKGKLGVISLNKELQEVLNPAADYKKEKTFGTVVFREGDKVMQIKNNYKL
KWEDIHGFETGEGVYNGDIGNIIRIDEYNKTFEILLTDDKKVVYEFDQLDELTHAYAMTV
HKSQGSEFPVVVMPMVGGPPMFLNRKLLYTAVTRAKKMLMLIGPQNYFYRMVKSGDTNER
RTALKQRIKMYGELNV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggagaccttaaaaggaacagtagatcatattattttccataatgacaaaaacggttat
accgtagcggattttgatgtggacggccaaatggtaacggtcgttggcaattttgaggag
ctgaaggagggcgaatttttaaagctgaccggcttctggaaggagcaccagagctatggc
gagcagtttcagatcgagagctatgcgctggatctcccgacctctgaggaaggcatcatc
cgttatctgagttcaggactcctgccgggtattggcgaaaagaccgctattgagatcgta
aaccattttggagccgacacgctggatatcctggacaaccatccagaccggctgagcgag
gttcacggcatcggcaaaaagacactcgacaaaataaaagaggtttacagtgaacagaag
gaaatccgggatgtcatgatccagatccaggaatatggcatttcctcgacctatgccatg
aagctgtataaaacctatcagagtgatacggtgcgtgttcttttggataacccctaccaa
atcatcaaggatgtgcgcggcattggctttaaaatagcagaccagatttccgctcagctg
ggttttgagtcccagaaccctaagcggattctctcgggcatcagcttctgccttcaggac
tgttactcaaggggcaacacctacatgaccgaaaaagaccttattgagcacagcgccagt
atcctcggggtttcaagggaggacattgaatttcagcttcaggagctggccctgcggggg
gacgtgcgtctggagttcatcgacgatgagcctgcctactatccctcggcccttttcgag
gcagaggacaacgcggccttgtctatggtacgcctggcaggcgctgtctttgaaatgcag
gaagttgatataccagccatgatcgcagcctatgaggaggatatgagcatccgtctggat
aaccggcaggcagaggccatcgaggcggccatcgaaaacggcattgccattattacaggg
gggccaggcacagggaaaacaacgattatcaacggcattgtctatattttcaagcgtctg
ggcatgaaaaccgttctggctgccccgacgggccgcgccgccaagcgcattacagagacc
accggcgagccggccaagaccatccaccggcttttggagtacgactactctggtgacgat
gattttccatccttcaaccgggacgaggaaaacccgcttgaggttgacgccattatactg
gatgaagcctcaatgattgatattgtgctgctcaacagcctgttggaggccatcaagccc
ggcacacgtctcattctggtaggcgacgccgaccagctgccctctgttgggccgggaaac
gtcttacaggatctgatcgagagcaatgtggtcaaggtagttcgtctggaccgtatctac
cgacagtcggaggaaagcatgatctccataaatgcccatgccatcaacgagggtatgatg
ccggaaatcaataaccaatctgactttatgtttatcaggacaatggacccggataaggtg
ctggatactattttagacctggttgcctggcgtattcccgaaaaaaaaggctttgacgcc
atgaaggacgtgcaggttatctcacccattaaaaagggaaagctcggcgttatttcgctg
aataaggagcttcaggaggtcctgaatccagcggcggactataaaaaagaaaagaccttt
ggtacagtagtgttccgcgagggggacaaggtcatgcagatcaaaaacaattataagctc
aagtgggaggatatccatggctttgaaaccggagagggtgtttataacggcgatatcggc
aatattatccgcattgatgagtacaataagacctttgaaatcctgctgaccgatgacaaa
aaagtcgtttatgagtttgaccagctcgacgagcttacccacgcttatgccatgactgtg
cacaaaagccaggggagcgaatttccggttgttgttatgccgatggtaggcggcccgccc
atgtttttaaaccggaagctgctgtacacagcagtgaccagagccaaaaagatgctgatg
cttatcgggcctcagaattatttttaccggatggtcaaatctggtgatacgaatgaacgg
cgtacagccctcaaacagcggatcaaaatgtatggagagctcaatgtctga
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