Enhydra lutris kenyoni (northern sea otter): 111146987
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Entry
111146987 CDS
T05871
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111146987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elk03400
]
111146987
Enzymes [BR:
elk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111146987
DNA repair and recombination proteins [BR:
elk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111146987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
111146987
NCBI-ProteinID:
XP_022358515
UniProt:
A0A2Y9JKX7
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSPTVASHVPFADLCSTLERIQRSKGRAEKMRHFREFLDSWRRFHDALHKNQKDV
KDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKGGKDALKLLNYRTPTGTRG
DAGDFAIIAYFVLKPRCLQKGSLTIQQVNDILDSIASNNSAGRKDLIKKSLLQLISQSSA
LEQKWLIRMIVKDLKLGFSEQSVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKQGGEYQYFSRNGFNYTD
QFGKSPQEGSLTPFIHSAFKTDIQICILDGEMMAFNPNTQTFMQKGTKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGRETLKKRYEILTSVFTPIPGRIEIVQKTQAHTQKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLVDELDILIVGGYWGKGSRGGMM
SHFLCAVAETPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSSILC
GTEKPEVYIEPCHSVIVQVKATEIVPSDMYKTGCTLRFPRIERIREDKEWHECATLDGLE
QLRGKASGKLASKHLYVGDSDEPQEKKRKAAPKMRKVIGIIEHLKAPNLSNVNKVSNIFE
DVEFCVMSGTDGHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSDKHDV
VKPEWLLECFKTKSCVPWQPHFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNRLKEVFSG
IKNSGAQAPGEMPSVIADLEHRYSWDRCPLSMFRHCIVYVDLYAVINDLSTSVKGTRLTV
TALELRFHGAKVVSRLAQGVSHVIVGEDQRRVADLKAFRRTLKRKFKILQQDWVIDSIDK
CELQEENRYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcgcagacttcaccaactgttgcgtctcatgttccttttgcagacttgtgc
tcaacgttagaacgaatacagagaagtaaaggacgagcagaaaaaatgagacacttcagg
gaatttttagattcttggagaagatttcacgatgcccttcataagaaccaaaaagatgtc
aaagactctttttatccagcaatgagacttattcttcctcagctggagagagagagaatg
gcgtatggaatcaaggaaaccatgcttgctaaactttatatcgaattgcttaatttgcct
aaaggaggaaaagatgcccttaaacttttaaattacagaacgcccaccggaactcgtgga
gatgctggtgactttgcaataattgcatattttgtgttgaaaccaagatgtttgcagaaa
ggaagtttaaccatacagcaggtaaatgacattttagactcaattgccagcaataattct
gccggaagaaaggacctaattaagaagagtcttcttcagctaataagtcagagttcagca
ctggaacagaagtggcttatacggatgattgtaaaggacttaaaactcggtttcagtgaa
cagtccgtattttctgttttccataatgatgctgccgagttgcataatgtcaccacagat
ctggaaaaagtctgcaggcagctgcatgatccttctgtaggactcagtgacatttccatc
actttattctcagcctttaaaccgatgctggctgctatagcagacattgagcggatcgag
aaggacatgaaacaccagagcttctacattgaaaccaagcttgatggggagcgcatgcaa
atgcacaagcagggtggggagtaccagtacttctcccgaaacggatttaactacacggat
cagttcggcaaatctccacaggaaggttctcttacaccgttcattcacagtgcgttcaaa
acagacatacagatctgtatcctggatggcgagatgatggccttcaaccctaacacacag
actttcatgcaaaaggggactaagtttgatatcaaaagaatggtggaggattctgatctg
cagacttgttactgtgtgtttgatgtactgatggttaataataaaaagctgggacgtgag
accctgaaaaagaggtatgagattcttaccagtgtttttacaccaataccaggcaggata
gaaatagtgcagaagacacaagctcatactcagaaagaagtgatcgatgctttgaatgaa
gcaatagataaaagggaagaggggatcatgataaaacatcctctgtcgatttacaagcca
gacaaaagaggcgaaggatggctgaagattaaaccggagtacgtggacgggctggtggat
gagctggacatcttaatcgtcgggggctactggggtaagggttcacgagggggaatgatg
tctcatttcttatgtgccgtagcagagacgcctcctcctggtgaaaaaccgtcagtgttt
catactctgtgccgtgtcggttcaggttacaccatgaaagaactatacgatctgggtttg
aagttggccaaacactggaagcctttccatagaaaagctccaccgagcagcattttatgt
ggaacagagaagccagaggtgtacatcgagccttgtcattctgtcattgttcaggttaag
gccacagagatcgtccccagcgatatgtataagactggctgcacactgcgttttccacga
attgagaggatcagagaagacaaagagtggcacgagtgcgccaccctggacgggctggag
cagcttcgcggaaaagcgtcgggaaagctggcttctaaacacctttacgtcggcgacagc
gatgagccacaagaaaagaagcggaaagctgccccgaagatgaggaaagttatcggcatt
atcgagcacttaaaagcacccaacctttctaatgtaaacaaagtgtctaatatatttgaa
gacgtggagttctgtgtcatgagcggcacggacggccatccgaagcccgatctggagaac
agaattgcagaatttgggggttacatagtgcagaatccaggcccagacacgtactgcgtc
attgcagggtccgagaacatcagagtgaaaaatataatttcttcggacaaacacgatgtt
gtcaagcccgagtggctgttggagtgttttaagaccaaaagctgcgtgccgtggcagcct
cactttatgattcacatgtgcccgtcgacaaaggagcattttgcccgtgaatacgattgt
tacggtgacagttatttcgttgatacggatttgaaccgactgaaggaagtgttctcagga
attaaaaattctggcgcacaagctcctggagaaatgccctctgtgattgctgatttagag
catcggtattcctgggaccgctgccctctcagtatgtttcggcactgcattgtttacgtg
gacttgtatgcggttattaatgacttgagtaccagcgtcaagggaacaagattaaccgtt
acggctttggagcttcgatttcatggagccaaagtggtttctcgtttagctcagggagtg
tctcatgtcatcgttggggaggatcagagacgtgtggcagatttaaaagcttttcgaaga
actcttaagagaaagtttaaaatcctgcaacaagattgggtcattgattcaatagacaag
tgtgagttgcaggaggaaaatcggtatttggtttaa
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