Enhydra lutris kenyoni (northern sea otter): 111152186
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Entry
111152186 CDS
T05871
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03022
Basal transcription factors
elk03420
Nucleotide excision repair
elk05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111152186
09124 Replication and repair
03420 Nucleotide excision repair
111152186
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
111152186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elk03021
]
111152186
03400 DNA repair and recombination proteins [BR:
elk03400
]
111152186
Transcription machinery [BR:
elk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111152186
DNA repair and recombination proteins [BR:
elk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111152186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
111152186
NCBI-ProteinID:
XP_022366276
UniProt:
A0A2Y9JZI1
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSDKEEEILERMGYDGGQRIWNRNEVRDDTGMDCGGAFLTGISQVMESTPSRGGLNRVHL
QCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAAVALW
VKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLRIALLGGGKAWSDDTS
QLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLSQAGLMKSTEPGEPP
CITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFSTLGKDYSVEGM
SDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGGTAHQPGFIVVETNYR
LYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRAHP
VMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVLVFE
NSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaaggaagaggaaatcttagaaaggatgggttacgatgggggccagcggatc
tggaataggaatgaggtgagggatgatactggcatggattgtgggggtgcatttctaact
ggcatctctcaggtgatggagagcaccccctcaaggggtggactgaaccgagtacaccta
caatgcaggaatctgcaggaatttctagggggcctgagccctggcgtattagatcgattg
tatgggcatcctgccacctgtttggctgtcttcagggagctcccctctttggctaagaac
tgggtgatgcggatgctctttctggagcagcctttgccacaagctgccgtagccctgtgg
gtgaagaaggaattcagcaaagctcaagaggaaagcacagggctgctgagtggtctccgg
atctggcacacccagctgctccctggtggtctccagggcctgatcctcaaccccatcttc
cgccaaaacctccgcattgcccttctgggtgggggcaaggcctggtctgatgacacaagt
cagctgggtcctgacaagcacgcccgggatgttccctcacttgacaagtatgccgaggag
cgatgggaggtggtcctacacttcatggtgggctcccccagtgcagctgtcagccaggac
ttggctcagctcctcagccaggctgggctcatgaagagcactgaacctggagagccgccc
tgcattacctcagctggcttccagttcctgttgctggacacccctgcccagctgtggtac
tttatgttgcagtatctgcagacagcccagagtcggggcatggacctagtggagattctc
tccttcctcttccagctcagtttctctactctgggcaaggattattccgtggaaggtatg
agtgattctttgttgaatttcctacaacatctacgtgagtttgggcttgttttccagagg
aagaggaaatctcggcgttactaccccacacggctggccattaatctctcatcaggtgtt
tctggagctgggggtactgcccatcagccaggcttcattgtcgtggagactaattaccga
ctgtatgcctacactgagtcggagctgcagattgccctcattgccctcttctcagagatg
ctctatcgattccccaacatggtggtggcacaggtgacccgggagagtgttcagcaggcc
atcgccagtggcatcacagcccagcagatcatccatttcctaaggacaagggcgcaccca
gtgatgctcaaacagacacctgtgctgccgcccaccatcacagaccagattcggctgtgg
gagctggaaagggacagactccggttcactgagggtgtcctgtataaccagttcctgtcg
caagtggactttgaactactgctggcccacgctcgcgagttgggcgtgctggtgttcgag
aactctgccaagcggctgatggtggtgaccccagcggggcacagcgacgtcaagcgcttc
tggaagcggcagaagcacagctcctga
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