KEGG   Enhydra lutris kenyoni (northern sea otter): 111160665
Entry
111160665         CDS       T05871                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
elk  Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03030  DNA replication
elk03410  Base excision repair
elk03420  Nucleotide excision repair
elk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:elk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111160665
   03410 Base excision repair
    111160665
   03420 Nucleotide excision repair
    111160665
   03430 Mismatch repair
    111160665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:elk03032]
    111160665
   03400 DNA repair and recombination proteins [BR:elk03400]
    111160665
Enzymes [BR:elk01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     111160665
    6.5.1.6  DNA ligase (ATP or NAD+)
     111160665
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     111160665
DNA replication proteins [BR:elk03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    111160665
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     111160665
DNA repair and recombination proteins [BR:elk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     111160665
   NER (nucleotide excision repair)
    Other NER factors
     111160665
   MMR (mismatch excision repair)
    Other MMR factors
     111160665
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C PucR DDR
Other DBs
NCBI-GeneID: 111160665
NCBI-ProteinID: XP_022379631
UniProt: A0A2Y9L134
LinkDB
Position
Unknown
AA seq 915 aa
MQRSIMSFFYPKKEGKVKKPEKETSNSVRETEPPPKVALKERNGEVPESDSPVKRPGRKV
ARVLGSEGEEEDEALTPSKGQKPAPGSPQVSPPSPVTFPESSPSLSSTSPVDISPAGIPK
RRTARKQLPKRTIQDVLEEQAKDEDREAKRKKEKGAETPPESLTEPEVSQEKEAEEEDQP
VTSPEHPETSAESLPDSASEPEVAGKPEAREEDPARPPPRAPKTVSSFFAPRKPATKKEG
KEEGPGTPRQEEAKGPPDPPSYNPAKNSYHPIDDACWKPGQKVPYLAVARTFEKIEEVSA
RLRMVETLSNLLRSVVALSPPDLLPILYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGR
QLESVRAEAAEKGDVGLVAESSRSTQRLVLPPPALTTAGVFAKFRDIARLAGSASTAKKM
DVIKGLFVACRHSEARYIARALSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPPGIVDAG
KGRTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGVPLKPML
AHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTSKYPDIISR
IPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIY
LNGQSLVREPLSRRRQLLRENFVQTEGEFVFATSLDTKDTEQIAEFLEQSVKDSCEGLMV
KTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYD
EESEELQAICKLGTGFSDEELEEHHHRLQALVLPSPRPYVRVDGAMAPDHWLDPSAVWEV
KCADLSLSPIYPAARGLVDGEKGISLRFPRFIRVREDKKPEEATTSAQVASLYRKQSQIQ
NQQGADLDSDSEDFY
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgcagcgaagtatcatgtcatttttctaccccaagaaggagggcaaagtgaaaaagcca
gagaaggagacctccaacagcgtcagagagacggagccgcctccaaaggtggcactgaag
gagcggaatggagaggtgcctgagagcgattctccagtgaagaggccggggcggaaggtg
gcccgggtcctgggcagtgaaggggaggaggaggacgaggccctcacaccctccaaaggc
cagaagcctgccccgggctctccacaagtctcccctcccagccctgtcacatttcccgag
agcagcccttccctctccagcacctctcctgtggacatctccccagcagggatcccgaag
cggcggacagctcggaagcagcttcctaagcggacaatacaggatgtcctggaggagcag
gccaaggacgaggacagagaggccaagaggaagaaggagaaaggagctgagaccccacca
gaaagcctcacagagcctgaagtgagccaagagaaagaagcagaggaagaggaccagccc
gtgacgtcccctgagcatccagagacctcggcagagtccctgccggacagcgcctcggag
cctgaggtggccgggaagcccgaggctcgggaggaggacccggccaggccgccccccaga
gctcccaagacggtcagcagcttcttcgccccccggaaaccggcaaccaagaaagaaggg
aaagaagagggacctggcactccaagacaggaggaggccaagggacccccggaccccccc
agctacaatcctgccaagaacagctaccatcccattgacgacgcgtgctggaagccaggc
cagaaggttccttacctggctgtggcccggacctttgagaagattgaggaagtttctgct
cggctccggatggtagagacgctgagcaacttgctgcgttctgtggtggccctgtcccct
ccagacctcctccccatcctctacctcagcctcaaccgcctcgggccgccccagcagggc
ctggagcttggcgttggtgacggcgtcctcctcaaggcagtggcccaggccacggggcgg
cagctggagtctgtcagggccgaagcagccgagaagggcgacgtggggctggtggcggag
agcagccgcagcacccagagactcgtgctgcccccgcccgctctcaccaccgccggagtc
ttcgccaagttccgagacatcgcgcggctggccggcagcgcttccacagccaagaagatg
gacgtcatcaaaggcctatttgtcgcctgccgccactcagaagcccgatacatcgccaga
gccctgagcggacggctgcgcctcgggctagcagagcagtcggtgctggccgccctcgcc
caggccgtgagcctcacgccccctggccaagaattccccccgggcattgtggatgctggg
aagggcaggacagcagaggcccgaaagacatggctggaggagcagggcatgatcctgaag
cagacgttctgcgaggtgcccgacctggaccggatcatccctgtgctgctggagcacggc
ctggagcgcctcccagagcattgcaagctgagcccaggggttcccctgaaaccgatgctg
gcgcaccccacccgcggagtcagcgaggtcctgaaacgcttcgaggaggcagctttcacc
tgcgagtacaaatacgatgggcagagggcacagatccatgtcctggaaggcggggaggtg
aagatcttcagcaggaatcaggaagacaataccagcaagtacccggacatcatcagccgc
atccccaagattaaactcccgtcagtcacatccttcatcctggacacagaagccgtggct
tgggacagggaaaagaagcagatccagccattccaagtgctcaccacccgcaaacgcaag
gaggtggacgcagcagaaatccaagtgcaggtgtgtctgtatgccttcgacctcatctac
ctcaacggacagtccctggtgcgcgagccgctttcccgacgccggcagctgctccgggag
aacttcgtgcagacggagggcgagtttgtcttcgccacctccctggacaccaaggacacg
gagcagatcgccgagttcttggagcagtctgtgaaagactcctgcgaggggctgatggtg
aaaaccctggacgtcgacgccacctacgagatcgccaagaggtcacacaactggctcaag
ctgaagaaggactacctcgatggcgtgggcgacaccctggacctcgtggtgatcggcgcc
tacctgggccgtggcaagcgggccggccgctacgggggcttcctgctggccgcctacgac
gaggagagcgaggagctccaggccatatgcaagctcggaaccggcttcagcgacgaggag
ctggaggagcaccaccacaggctccaggccctggtgctgcccagcccgcgcccctacgtc
cgggtggacggcgccatggcccctgaccactggctggaccccagcgccgtgtgggaggtg
aaatgcgctgacctgtccctgtcccccatctaccccgctgcccggggcctggtggatggt
gagaaggggatctcccttcgctttcctcggtttatccgcgtccgtgaagacaagaagcca
gaggaggccaccaccagcgcccaggtggcctcgctgtacaggaagcagagtcagattcag
aatcagcagggcgcggacctggactccgactcggaagatttctactag

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