Escherichia coli P12b: P12B_c1564
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Entry
P12B_c1564 CDS
T02030
Name
(GenBank) hypothetical protein
KO
K11531
lsr operon transcriptional repressor
Organism
elp
Escherichia coli P12b
Pathway
elp02024
Quorum sensing
elp02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
elp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
P12B_c1564
02026 Biofilm formation - Escherichia coli
P12B_c1564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
elp03000
]
P12B_c1564
Transcription factors [BR:
elp03000
]
Prokaryotic type
Other transcription factors
Others
P12B_c1564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
MarR_2
HTH_Crp_2
Sigma70_r4
HTH_24
HTH_37
HTH_23
HTH_CodY
MarR
HTH_IclR
Crp
Motif
Other DBs
NCBI-ProteinID:
AFG40425
LinkDB
All DBs
Position
1682908..1683861
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AA seq
317 aa
AA seq
DB search
MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGII
RVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQML
AIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASS
ADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGA
VGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGY
INALVTDQDTAAAILRS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaacgattcggcaatttcagaacagggaatgtgtgaagaagaacaggtcgcg
cggatcgcgtggttttactatcacgacgggctgacccagagcgagatcagcgatcgtctc
ggcctgacgcgtttgaaagtgtcgcgattgctggagaaagggcatcagtccggcattatt
cgcgtacagattaattctcgctttgaaggctgtctggaatatgaaactcaattacgtcgt
cagttttcgctgcaacatgtccgggtgatccctgggcttgcggatgctgatgtcggtggg
cgactggggataggcgcggcgcatatgttgatgagtttacttcaaccacaacagatgctg
gcgattggttttggcgaggcaaccatgaatacgctgcaacgcttaagtggttttatttcg
tcacagcaaattcgcctggtcacgctctccggtggcgtcggttcttatatgacgggaatc
gggcagcttaacgcggcgtgcagtgtgaatattattccggctccgttgcgggcatcctcc
gctgacattgcccgtacgctaaaaaatgaaaattgcgtcaaagatgttctgttagccgcg
caagcagcggatgtggcgattgtcggcattggtgctgtgagtcaacaggacgatgcgaca
atcattcgctccggttatatcagccagggcgaacagttaatgattggccgaaaaggggcg
gttggcgacattttaggctacttttttgatgcaaaaggtgacgttgtcacgaatatcaaa
atacataacgaactgattggcttacctttaagcgcgctgaagaccatacccgtccgggtt
ggcgtggcagggggagaaaataaagccgaagcaattgccgctgcaatgaaaggcggttat
atcaacgcactggttaccgatcaggacacagcagcggcgattttacgtagttaa
DBGET
integrated database retrieval system
