Esox lucius (northern pike): 105007451
Help
Entry
105007451 CDS
T04894
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
els
Esox lucius (northern pike)
Pathway
els03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105007451 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
els03400
]
105007451 (lig4)
Enzymes [BR:
els01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105007451 (lig4)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105007451 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
BRCT_2
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
105007451
NCBI-ProteinID:
XP_010864693
UniProt:
A0A3P8ZMV0
LinkDB
All DBs
Position
LG22:complement(22486001..22495961)
Genome browser
AA seq
914 aa
AA seq
DB search
MEGASQSKSASPQSSVAAQVPFLHLCTTLEKIQKTKLRPDKSKFLRDFIDSWRKFHAALH
KDSPTATDSFYPAMRLIVPPFERERMAYGIKESMLAKLYIDVLGLPKNGPEANKLLNYRA
PTTSQGEAGDFALMAYFVLKKRCTSQGNLTIKDVNDFLDSVAINNASKQKDLVKKSLLHL
ITQSTALEQKWLIRMILKDMKLGISKETVLQVFHPDAAELYNVTTDLNKVCRQLHDPFVS
LSEVSIGLFSAFKPMLAAVGNMRQVEKQMGNSTFFIETKLDGERIQLHKDGDVYKYFTRN
SFEYTQQFGASPLEGSLTPFIHNIFKPHIVNCILDGEMMAYNPTTDTFMQKGSKFDIKKL
VDDSELQTCFCVFDVLLINDQKFGNDTLKKRHEHLQTVFTPVKGRIHVVPKTEAKTMQEV
VNALNEAIDNREEGIMVKDPLSIYKPDKRGEGWIKIKPEYVDGLMDELDLLIVGGYWGKG
RRGGMMSHFLVAVAEAPKPGEKPSVFHTFCRIGSGYTMKELYDLGLKLAKYWKVYRKNDP
PASILCGTERPEVYIDPCNSVIIQVKAAEIVSSDMYKTNCTLRFPRIEKIREDKEWHQCM
SLADLEQFRNKASGKLFSRHLRLNDDNEPEKKKRKTPAAAKPKKAAGVIDHFKSQDLSGV
TKETDMFEDVEFCVMNGSEDHPKTELEKAVARCGGIVVQNPGQETYCVIAAIENMRVKNL
ISSNQHDVVWAAWLLECLDRKQVVPWQPSHMIHMSPSTKEHFAKEYDCYGDSYFVDTDVQ
QLKEVFGRISSVDTIMSHCIAKVEERYGWHDLPTSMFRHLRFYLDMYADIGEVNSLIPNT
CLDMRALELRFHGGKVVQKLEEGVSHVIVVEETRVLDLRTLRRLFTKKFKIVKESWVTDS
IKAGYLQNDSDYLV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcttcacaaagtaaatctgcttctccccagagctctgtcgcagctcaagtt
ccatttcttcacctgtgcaccacattagaaaagatccagaagaccaaactccgcccagac
aaatcaaagtttcttcgggacttcatagactcctggaggaagttccatgccgcccttcac
aaagacagtcctactgccacagactcgttctaccccgccatgcgtctcatagtcccccca
tttgaaagggagcgtatggcctatggcattaaagagagcatgttagccaagctgtacata
gacgtcttgggtctccccaagaatggaccggaggctaacaaactgttgaattaccgtgcc
ccaaccacgtctcagggagaggcgggagactttgctctcatggcttactttgtgttaaag
aaacgctgcacaagccaaggaaatctcaccatcaaagatgttaatgactttctggactct
gtggcaatcaacaatgctagtaagcagaaggacctggtgaagaagagcctgcttcatcta
atcacccagagcacagccctagagcagaaatggctcatccgcatgatcctgaaggacatg
aagctggggatcagcaaagagacagtgcttcaggtgttccacccagatgcagccgagctt
tataatgtcaccaccgatctaaataaagtgtgccgacagcttcatgacccctttgtgtct
ctcagcgaagtgtccattggccttttttctgccttcaaacccatgttggctgctgtggga
aatatgcgccaggtcgagaagcaaatgggcaacagcaccttcttcattgagaccaagctg
gatggagagcgcatccagttgcacaaggatggtgatgtctacaagtacttcacaaggaac
tcctttgagtacacccagcagttcggggcttcacctctagagggctctctgacgcctttt
attcacaatatctttaagccgcacatcgtcaactgcatcctggatggggaaatgatggct
tacaaccccaccactgacactttcatgcaaaagggaagcaagtttgatatcaagaagctg
gttgatgactctgagctgcaaacatgcttttgtgtttttgatgtgcttctgattaatgac
caaaagtttggtaatgacacattaaaaaagcgccatgaacaccttcaaactgtttttact
cctgtaaaaggaaggatacacgttgtgcctaaaacagaggccaaaaccatgcaagaggta
gtgaatgcccttaacgaagccatcgacaatagggaggagggaatcatggtgaaggatccg
ttgtcaatatacaaacctgataagcgtggtgaaggctggatcaagatcaagccggagtat
gttgatggcttgatggacgagctcgaccttttaattgttggaggctactgggggaaagga
aggcggggcggcatgatgtctcatttccttgttgctgttgctgaagctccaaagcccgga
gagaaaccctctgttttccacacattttgccgcattggctctggctacaccatgaaagag
ctgtacgacttaggcctgaagctggccaaatactggaaagtctatcggaaaaatgaccct
ccagcttctattctgtgtgggacggagagacctgaagtctacatcgacccatgcaactcg
gtcatcatccaagtaaaggcggctgaaatagtcagcagtgacatgtacaaaaccaattgc
acactgcgcttccccaggatagagaaaatccgtgaagacaaagaatggcaccagtgcatg
tccttagctgatctcgaacagttccgcaacaaggcatccgggaagttgttctcacgccac
cttcgcctcaatgatgacaacgagcccgaaaagaagaagcgtaagacgccagcagctgcc
aagcccaagaaggctgctggtgtcatcgatcacttcaagtcccaggacctgtctggtgtc
accaaagagactgatatgtttgaggatgtggagttctgcgtgatgaacgggagtgaggac
caccccaagacagaattggagaaggctgtggcccggtgtggtggtattgtagtccagaac
ccaggacaggagacctactgtgtgatcgctgccattgagaatatgcgcgttaagaacctg
atatcatccaaccagcatgacgttgtgtgggctgcctggctgctggagtgtctagacagg
aagcaggtggtgccctggcagccaagtcacatgatccacatgtcaccttccactaaggag
cactttgccaaggagtatgattgctacggagacagctactttgtggacacagatgtgcag
cagcttaaggaagtcttcggtcggattagcagtgtagacactataatgtcgcattgcatt
gccaaggtggaggagcgctacggctggcatgacctccccaccagcatgttcagacattta
aggttctacctggacatgtatgccgacattggagaagtgaatagccttatcccaaacaca
tgtctggacatgcgagctctggaacttcgtttccacggcgggaaagtagtgcagaagctg
gaggaaggggtctcgcatgtcatagtggtggaggaaacaagagtattggatttaagaacc
ctcagacgactttttaccaagaagtttaagattgttaaggaatcatgggtaacagattct
atcaaagcagggtatttgcagaatgacagtgactacttagtttga
DBGET
integrated database retrieval system
