Esox lucius (northern pike): 105007640
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Entry
105007640 CDS
T04894
Symbol
ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
els03009
]
105007640 (ddx55)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105007640 (ddx55)
Ribosome biogenesis [BR:
els03009
]
Eukaryotic type
Pre-60S particles
Helicases
105007640 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
YbjM
DUF1340
Motif
Other DBs
NCBI-GeneID:
105007640
NCBI-ProteinID:
XP_010864940
UniProt:
A0A3P8XDI0
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Position
LG14:27869787..27875170
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AA seq
605 aa
AA seq
DB search
MENTTEGKWDSLPVKLHDSIMQTLDELGFTHMTPVQSACIPLFMRNKDVAAEAVTGSGKT
LAFVIPIIEILLKREDKLKKMQVGALIVTPTRELALQISEVMGQFLKKFPQFRQILLIGG
SNPIEDVEKFKEQGANILIATPGRLEDMFRRKADGLDLTLSVKHLEVLVLDEADRLLDMG
FEASLNVILGYLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASCMQKTPA
RLCNYYIICRAEDKFNSLVAFLRHHKHEKQLVFFSTCACVEYFGRALEVLIKNVSIHCIH
GKMKHKRNKIFSEFRSLKSGVLVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNQGNALVFLLPMEESYVTFLSINQKCPLEQMAPVSDVVDVLPKVKALALADRAMFDR
GMRAFVSTVQAYAKHECSLIFRVKDLDFVALARGFALLRMPRMPELKGKNFPEFEEMAID
TDSIRYKDKQREKLRQKLLIELKLKREERAAAPKRHNDKNKAWSKQKNRKERRRKTAAKR
NRDEGSDMDDEDMKELLKDTRLLKRLKKGQISEEDFEEQLTGGQKNQRKTAGPSEDPHSS
AGEDV
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacaactgaagggaaatgggatagtttacccgttaaacttcacgacagtatt
atgcaaaccctcgatgagcttggatttacgcacatgacaccagttcagtccgcctgtatt
ccactgtttatgagaaacaaagatgtagctgccgaggccgtgactggcagtggaaaaaca
cttgcattcgtgattcccatcatagaaatacttctaaagcgagaggacaaactaaagaaa
atgcaggttggagctctaatcgtcacaccgaccagagaactggccctgcagatcagtgag
gtgatgggtcagttcctcaagaagttccctcagttcagacagattctgttgatcggagga
agcaaccccattgaggatgtggagaagttcaaggagcagggagccaacatattgattgca
acgcctggacgtctggaagacatgttcaggaggaaagctgacggtctggacttgaccctg
tcagtcaagcacctggaagtcctggtgctggatgaggctgatcgcctgcttgacatgggc
ttcgaggccagtctgaatgtcatcctggggtatctccctaagcagcgccgtacaggtctg
ttttcagccactcagactcaggagctggagaagctggtgagagctggcctcaggaaccct
gtacgcatcacagtcaaggagaagggtgtggcggccagctgtatgcagaaaacaccagcc
aggctctgcaactactacataatctgtcgagcagaggacaagtttaacagtctggtggca
tttctcagacatcacaaacatgagaaacagctagtgtttttcagtacgtgtgcatgtgtg
gagtactttggccgagctttggaggtgttgattaagaatgtttccatccactgtatccat
ggcaaaatgaaacacaagcgcaacaagatcttctcagagttcaggagtctgaagagtggt
gtcctggtgtgtactgacgtaatggccagaggcatcgatatcccagaagtccactgggta
ttgcagtacgacccccctagctctgccagtgcctttgtccatcggtgtggacggacagca
cgcatcggtaatcaaggcaacgccctcgtattcttgctgccaatggaggaaagctacgtc
acattcctgtccatcaaccagaagtgtcctttggagcagatggccccagtgagtgacgtg
gtggatgtactgcccaaggtgaaggccctggcgctagcagaccgggccatgttcgacagg
ggcatgagggcctttgtctcaaccgtacaggcctacgccaaacatgagtgcagcctcatc
ttcagggtcaaagatctggactttgttgcgctggctcgtggatttgccctcctccgcatg
cccaggatgccagagctgaaggggaaaaacttccctgagtttgaagagatggccatagac
acagacagcatccgctacaaggacaaacagagggagaagttgaggcagaagctgctgatt
gagctgaagttgaagagagaggagagggctgcagcaccaaagaggcacaacgataagaat
aaggcctggtccaaacagaagaatagaaaagagcgcaggaggaagaccgctgccaagagg
aaccgggatgagggctcagatatggatgatgaggacatgaaggagctgttgaaagacact
cggctcttgaagaggctgaaaaaagggcagatcagcgaggaggactttgaggaacagctg
acaggtggacagaaaaaccagaggaagacagcaggaccctcagaggacccacacagctca
gctggagaggacgtctga
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