Esox lucius (northern pike): 105011345
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Entry
105011345 CDS
T04894
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
els01002
]
105011345 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105011345 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105011345 (usp13)
Enzymes [BR:
els01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105011345 (usp13)
Peptidases and inhibitors [BR:
els01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105011345 (usp13)
Ubiquitin system [BR:
els04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105011345 (usp13)
Exosome [BR:
els04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105011345 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
105011345
NCBI-ProteinID:
XP_010869604
UniProt:
A0A3P8XIJ4
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Position
LG08:complement(7744969..7780222)
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AA seq
871 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKSPGAAGGAIPRRRNGKVFLDLELNRDFNGDEYECEDEAKL
VIFPDHYEIPLPNIEELPALVTIACDAVLNAVSAYKKQEHDSWEEEIQTSKHSRGLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGSVLCGKWFFDGAGGNGHALEHYKETKFPLAVK
LDNITPDGADIYSFDEEEAVLDPQISEHLQHFGIDMLQMQRNGTENGHHNTDNSNDARPR
VSEWEVIQEAGMKLKAVYGSGFTGIKNLGNSCYLGTTMQVLFSIPEFQRAYVGNLQRIFD
YSPLDPTTDFNTQMAKLGHGLLSGLFSKPPIKSELIEQVMKEEHKVLDWHQPKGISPKMF
KALISRGHPEFSSNRQQDAHEFFLHLINLVERNSAGSENPSDVFRHLVEERVQCCQTKRV
RYTHKVDYVMQLPAPMEAASNREELIAYEAKRKEAEENMRAPPEPVRARIPFTACLQAFT
EPENVPDFWSSALQAKSAGVKTSRFASFPEYLVMQIKKFTFGVDWVPKKLDLSIEVPDFL
DLSRFRGTGLQAGEEELPDLAPPIVLPEDTRDNSNSSDSPEIDESAAMQLAEMGFPLEAC
RKAVYYTGNMGPEMAFNWIIAHMEEPDFAEPLALPSFMEPATSMASPGLAGTPLDNQPPE
ESIAILTSMGFPRRHTVQALRASNNNLERALDWIFTHPEREEDEETSDALSDMADTTEPN
DNVFSNANTNSDSTLSPDQDPSGPRVKDGPGRYELFAFISHMGASTMSGHYICHVKKEGR
WVIFNDHKVCLSERPPKDLGYIYFYRRLSSR
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatctaggagagctgttggtcccatatatgcccaccatcagagttcccaga
acaggagacagggttttcaagagcgaatgtgccttttcctacgattctcccgagtctgag
ggaggcttgtatgtgtgtatgaacacattcctgggcttcggcagagaacacgtggaaaga
cattatcgcaaaaccggacagagtgtgtatatgcaccttaaaaggcacgtcaaagagaaa
tccccgggtgctgcaggaggggccatcccccgaagaagaaatggaaaagtgtttctggat
ctagaactaaaccgcgattttaacggagacgaatatgagtgtgaagacgaagccaagctt
gtcatattcccagaccactacgagattcctctaccgaatattgaggagttgccagcgctg
gtgacaatagcctgtgacgccgtgctgaatgccgtgtcggcctacaaaaaacaggagcat
gactcctgggaggaggagatccagacgtccaaacactcccggggcctccggcagctggac
aacggcgtgaggatccctcccagcggctggaagtgtcagaagtgtgagatgagagagaac
ctgtggctgaacttgacggatggatcagtgctttgtggcaagtggttctttgacggtgct
ggaggaaacggccatgctctggaacactataaagaaaccaagttccccctggcagtcaag
ctggacaacatcaccccagatggagcagatatttattcgttcgatgaagaggaagcggtg
ctggacccacaaatatctgaacacctgcaacactttgggattgacatgctgcagatgcaa
cggaacgggacagaaaatggccaccacaacacggacaactccaatgacgcacggccgcgg
gtcagcgagtgggaggtcatccaggaggccggcatgaagctgaaggcggtttacggatcg
ggtttcacgggcatcaagaacctgggcaacagctgctacctgggcaccacaatgcaggtc
ctcttcagcatcccagagttccagagggcgtatgttggaaatctacagaggatatttgac
tactcaccgcttgaccccaccacagacttcaacacacagatggctaaactcggccacggg
cttctgtcaggcctgttctccaaaccgccaataaaatcagagctcattgaacaggtgatg
aaagaagaacacaaggtattagactggcaccagccgaagggaatttcccccaagatgttc
aaagccctgatcagtaggggacatccagagttctcctccaacagacagcaagacgcacac
gagttcttcctgcacctcatcaacctggtggagagaaacagtgccggctctgagaacccc
agcgacgtgttccgccacctggtggaggaacgggtgcagtgttgccagacaaagcgggtg
cgctacacccacaaggtggactatgtcatgcagctgcctgcccccatggaggccgcctcc
aacagagaggagctgatagcgtatgaggccaagcggaaagaagcagaggagaacatgagg
gcccctcctgagcctgtgagggcccggatcccattcacagcgtgcctgcaggccttcaca
gagccagagaatgtcccagacttctggagttcagctttgcaggccaagtcagctggagtc
aagacttcccgttttgcttccttcccagagtatctggtgatgcagattaagaagttcact
ttcggggtggactgggttccaaagaaattagatctatccatagaggttccagacttcctg
gacctgtctcgtttccggggtactgggctgcaggcaggagaggaagagcttcctgacctc
gcaccgcccatcgtgcttcctgaagacaccagagacaactcaaactcctcagattcccca
gaaatagacgagtcggcggccatgcagctggcagagatgggcttccccctggaggcctgt
cggaaggctgtctactacacagggaacatgggccctgagatggccttcaactggatcata
gcccacatggaggagcctgacttcgctgagccgctggccctgccgtccttcatggagccg
gccacctccatggccagccctggtctggccggcaccccgctggacaaccagccaccggag
gagagcatcgccatcctgacctccatgggcttcccccgccggcacaccgtccaggccctc
agagcctcgaacaacaacctggagcgtgcgctggactggatcttcacccaccccgagagg
gaggaggatgaggagaccagcgacgcactgtctgacatggccgacaccacagagcccaac
gacaacgtcttctccaacgctaacacgaacagcgattccaccctgtccccagaccaggac
ccctcaggaccccgtgtcaaagatggacctggacgttatgaactttttgccttcatcagt
cacatgggagcatccacgatgtctggtcattatatttgccacgtaaaaaaagaaggaaga
tgggtgatcttcaatgaccacaaagtgtgtttgtcagaacgtcctccaaaagacttggga
tacatttacttttatcgtcggctgtctagcagatag
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