Esox lucius (northern pike): 105012338
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Entry
105012338 CDS
T04894
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
els
Esox lucius (northern pike)
Pathway
els03022
Basal transcription factors
els03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105012338 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
105012338 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
105012338 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
els03400
]
105012338 (gtf2h4)
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105012338 (gtf2h4)
DNA repair and recombination proteins [BR:
els03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105012338 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
105012338
NCBI-ProteinID:
XP_010871408
UniProt:
A0A3P8YPF0
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All DBs
Position
LG10:3315569..3321891
Genome browser
AA seq
461 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPTILDKLYNHPATCLAVYRELPPLAKNYVMRMLFLDQPLP
QAALALWVKKDSQKDHDECVSVLSGLRLCHTQQLQGGLQGNILNPIFKDNLRIALLGGGR
AWADQGDSLGPDRHARDVESLDKYALERWEVILHFMVGSPSAAVSQDLSQLLIQAGLMRA
EVGDAPCITSAGFQFLLLDTASQLWYFTLQYLNTAQTRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLSAGTTANSSSATGVVPGT
GDSGFIVVETNYRLYAYTNSELQIALVALFSECLYRFPNVVVAQVTRESVQQAIANGITA
QQILHFLRTRAHPVMLKQNPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQADFEVL
RDRAQGMGCLVWQNVTHRVMVVSPQGHSEVKRFWKRQKSHT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgcgtgcagttacaatgcaagaacctccacgaatatctaaaagagttaagt
cccactatcttggacaaactgtacaaccaccctgccacatgtctggcagtttacagggag
ctccccccattggcaaagaattatgtgatgcggatgctgtttctagatcaaccacttccc
caggcggccttggctttgtgggttaagaaagacagtcaaaaggaccatgatgagtgtgtc
tcggttctgtcagggctccgactctgccatacccaacagctccagggaggcctgcagggg
aacatcctgaaccccatattcaaagacaacctgaggatagcgctactgggagggggcaga
gcgtgggccgaccagggggacagcctgggtcctgacagacatgcgcgggacgtggagagc
ctggacaagtacgccctggagcgctgggaggtgatcctgcacttcatggtgggctcgccc
agtgctgctgtcagccaggatctgtcccagctcctcattcaagctggcctcatgagagct
gaggttggcgacgctccctgtatcacctctgctggtttccagttccttctcctggacact
gcctcccagctctggtacttcaccctacagtacctcaacacggcgcagactcgtgggatg
gatctagtggagatcctgtccttcttgttccagcttagtttttccacattaggcagagat
tattctgtggaaggaatgagtgagtccttgcttacattccttcagcacctcagagagttt
ggcctcgtgtttcagaggaagaggaagtccaggcggtactaccccaccaggctggccatc
accctgtccgccggcaccaccgccaactcctcctcagccacgggcgtggtccctgggacg
ggagactcgggtttcatcgtcgtggaaaccaactatcgcctgtacgcctacacaaactct
gagctgcagatcgccctggtggctctgttcagcgagtgtctctaccgcttccccaatgtg
gtggtggctcaggtcaccagggagtcggtacagcaggccatcgctaacggcatcactgca
cagcagattctccacttcctaaggaccagggctcatcctgtcatgttaaaacagaaccca
gtgttgccccccaccatcacagaccagatccgactatgggagctggagagagatcgactc
cagtttactgagggagtgctgtataaccagttcctgtcccaagctgactttgaggtgctg
cgggatcgagctcagggtatgggctgcctggtgtggcagaacgtaactcatcgtgtcatg
gtggtgtcgccccagggacacagcgaagtcaagaggttctggaaacgacagaaaagtcac
acgtga
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