Esox lucius (northern pike): 105013668
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Entry
105013668 CDS
T04894
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Pathway
els03013
Nucleocytoplasmic transport
els03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105013668
03015 mRNA surveillance pathway
105013668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105013668
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105013668
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105013668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105013668
NCBI-ProteinID:
XP_010873646
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All DBs
Position
LG12:complement(10248222..10255605)
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AA seq
490 aa
AA seq
DB search
MATDSWALAVDKQENTTDSFGSLAIRAPLRGDAITRKAKHGNAQHVENGTNVEEEAEDKA
AQSLLNKIIHTSLVNTTNQVEVLQRDPNSPLYSVKTFEELRLKEELLKGVYSMGFNRPSK
IQENALPMMLAEPVCYPSGSRPQNLIAQSQSGTGKTAAFALAMLSHVNPAKKWTQCLCIS
PTYELALQTGKVIEQMGKYYPEVKLAYAIRGNKLDRGMKLQEQIVIGTPGTVLDWCSKLK
IIDPKKISVFVLDEADVMIATQGHQDQSIRIQRMLPKECQMLLFSATFEDSVWKFAERVV
PDPNIIKLKREEETLDTIKQYYVLCSDKEEKFTALCNIYGAITIAQAMIFCHTRKTAGWL
AAELTKEGHVVALLSGEMTVEQRAAVIERFREGKEKVLVTTNVCSRGIDVEQVSVVINFD
LPMNKDGNADNETYLHRIGRTGRFGKRGLAVNMIDSKHSMNILNQIEDHFNKKINKLDTD
DLDEIEKISN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggctactgattcttgggccctggctgtcgataaacaagaaaatacaacggattctttc
ggctccctggcgataagagctccacttcgaggtgatgctataactagaaaagccaaacat
ggcaatgcacaacatgtggagaatggcaccaacgtggaagaagaagctgaggacaaagca
gcacagtcgttgttgaataagattatccacaccagcctggtgaacactaccaatcaagta
gaggttcttcagagggatcccaactcacccctttactcagtcaagacatttgaagagctg
agactgaaagaagagttgttaaaaggagtgtatagcatggggttcaacagaccctctaag
atccaggagaatgccctgcccatgatgctggcagagcccgtgtgttatccctctggttcc
agacctcagaatctgattgcccaatcacagtccggcacaggtaaaacggctgcctttgct
ctggccatgctcagccatgtaaacccagccaaaaaatggactcagtgtctctgcatttcc
ccaacgtacgagctagctttgcagactggtaaagttattgagcagatgggcaaatactat
cctgaggtgaaattggcatatgccattcgtggcaataaattggaccgagggatgaagctc
caggagcagatcgtcattgggacacctggcacggtcctggactggtgctccaaactcaag
atcatcgaccccaagaagatcagcgtctttgtgttggacgaggctgacgtcatgatcgcc
acacagggtcaccaggaccagagcatccgaatccagagaatgttaccaaaggaatgtcag
atgttgctgttctccgccacatttgaggactctgtgtggaagtttgcagagagggtggtg
ccagaccccaacatcatcaagctgaaacgtgaggaggagactttggacaccatcaagcag
tactacgtgctctgcagcgataaagaggagaagttcacagcactctgtaatatctatgga
gccatcactatcgcccaggctatgatcttctgtcacactcgaaagacggctggctggttg
gctgctgaactaaccaaagagggccatgtggtggcactgttgagtggggagatgactgtg
gagcagagagcagcagtcattgaacgcttcagggaagggaaagagaaagtcctggtgacc
accaacgtatgctcccgaggcattgatgttgagcaagtttccgtggtgatcaactttgac
ctgcctatgaacaaagatggaaacgctgacaacgagacgtaccttcaccggattggcaga
acagggcgctttgggaaaagggggcttgccgtcaatatgattgacagcaaacacagcatg
aacattctcaaccaaattgaggaccatttcaataagaagataaacaaacttgacactgat
gacctggatgaaatcgagaaaatcagcaactga
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