Esox lucius (northern pike): 105013931
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Entry
105013931 CDS
T04894
Symbol
agrn
Name
(RefSeq) agrin isoform X6
KO
K06254
agrin
Organism
els
Esox lucius (northern pike)
Pathway
els04512
ECM-receptor interaction
els04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105013931 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105013931 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
els00535
]
105013931 (agrn)
Proteoglycans [BR:
els00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105013931 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
SEA
EGF
CFAI_KAZAL
Laminin_G_3
hEGF
FG-GAP_3
C7_FIM2_N
Motif
Other DBs
NCBI-GeneID:
105013931
NCBI-ProteinID:
XP_012991896
LinkDB
All DBs
Position
LG12:23195662..23428687
Genome browser
AA seq
2092 aa
AA seq
DB search
MLFCPYNFFFAVFVTMGSQRRLTHLYGWALMIFAVFCQRCQGSCPEKDLEKREEEANVVL
TGTVEEIMNMDPVQNTYSCKVRVWRYLKGKTMVNGEVLLDGGNKVMIGGFGDPGICDNQV
ATGDTRIFFVNLAPEYMWPAHKNELMLNSSLMRITLRNLEEVELCVEDHRMINADKPVHF
TPAQPPDGCRGMLCGFGAVCERDAADPSKAQCVCKKTCPTVVAPVCGSDSSTYSNECELE
KAQCNTQRRIKVLRKGPCALKDPCSEMTCSYGSTCIQSSDGQSAKCMCPLSCEGKPEQVV
CGSDGQDYRNDCELHKKACNTKKNIRLQFQGSCDPCKDSENKLNVVCSVEPRSRKVVAIT
DTSCPPTNDPLCASDGQTYASECHMGRVAMQKDVKLRKIHAGRCKKQEECREECAFNSVC
LVERLGVRCSCEPIQCDGTYKPLCGKDGRTYANDCERRRAECQAKAPIPVKQQGPCDLDT
PSPCKAKSCEFGSVCVVKNDEPVCECPDACPQTPDPVCGSDGQSYGSQCEMRAMGCALQK
EIHIHRRGSCDKACANCSFGAICDAQSGRCVCPQECVESHQPVCGSDGSTYNSECELHVR
ACTKQLDLRVVAQGECRTCGSTVCAWGARCIQNKCECPQCQAQAFSPVCGSDGVTYDNAC
ELGVASCVLKRKIEVAKPGSCDEECGSGGSGSGVESCEHDRCRTFGGSWDEDAEEDRCVC
EFDCHRVPRNQVCGSDGRTYNNQCELKKARCDKQEHLQIQNQGPCTAVSVPELTAPQHCS
QSVYGCCRDNKTAALGVGLAGCASTCQCNPYGSYKATCEPASGQCSCKPGVGGKKCDRCD
PGFWNFRGIVTENLSGCTPCNCDSVGSVRDDCEQMSGLCSCKTGVKGMKCNVCPDGSKMG
MSGCVTGANAPTSCKELDCKFGSSCVEINGQAHCECPSPDCGDKNKTKVCGSDGVTYADK
CQLRTIACRQDKHITVEHFGQCTESIAEPAGRPAFNAPTPRTTTPSTAHVRLTSPGRFTS
TSPQDEDQAQDPLVLYAVPTPMPEDDDIFTEASTSAMATEGALAANHPVTTPHPPPHLTI
PRLPSHTSPGSSHATFEDSGSGQPSGDDQGEEEASGMEVSEASGEEPVDPEAVGTTTPTA
EERSSCDNTPYGCCPDGKTASSSPEGANCPSTMRFSGFLHLDQVEGQEVFYTPEMEDPKS
ELFGETARSIESALNELFRKSEVQKDFMTVRVRSLAPSNSILAFVEAHFDPETRYNVEDI
NGALLKQLKAAKETAIVVKKPEEENIQFTNYGISSLPYFTTTTATTPTASTTTSTTLPPP
TSSFITSPRPYTTRRPYTSRRTTTTPASTTTSAPASTSTASPLPRARPVTHHTKAPRPCD
SHPCRHGGTCEVNGTDFTCICPAGRGGSVCEKLIKYFIPSFGGKSYLAFDTMKAYHTVRI
AMEFRAAEMTGILLFNGQDGKKDFLSLTLVNGKVELKFNTGSGTGTLVSQVQIKQGRWHQ
LVVTRNRRNAMLSVDNEPQIEGSSPPGTDGLNLDTNLFIGGVPEDMVPDAKERTSIGTGL
VGCVRMLDVNNLVYNLQEKGDKVLYGTGVGECGNNPCQPNPCRNGASCQVKEAEMFHCTC
VNGFSGPTCADSHNPCEPNLCHRSSQCQVLPEGGYKCECSMGREGRHCERVTEKKGTYMP
FFSGDSYLELKGLHTYGHDLHQKISMTVVLLANDSNGMIFYNGQKTDGKGDFISLALNDG
ILEFRYDLGKGPAVIRSKDKMKMGVWNTVNLERASRKGEININGKDPVRGESPKSRKNQH
TALNLKESLFVGGAPDFSRLARAASLKDGFKGAIQKITLMGTPILRQENALHSSDVAMFE
GHPCSREPCNNGGRCNPVLESHECVCQHGFTGTQCQNAVFEKSAGETESIAFDGRTFIEY
HNAVTKSEKALLVNKFELTIKTEATQGLVLWSGKGVERSDYIALAVVDGRVQMTYDLGSK
PVVVRSTVRVNTNRWIRIKASRALRDGSLQVGNEAAVTGSSPLAATQLDTDGALWLGGLE
ELAVARRLPKAYSTGFVGCVKDVVVDGVELHLVEDALNSPKILHCSAAMAKK
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atgttattttgtccatataactttttctttgccgtttttgtgactatgggatcacaacga
agactaactcacttgtatgggtgggcattgatgatattcgcggttttctgtcaacggtgt
cagggaagctgcccggagaaagacttggagaaaagggaagaggaagcgaacgtagtttta
actggtaccgttgaagaaatcatgaacatggacccagtgcagaatacatactcttgcaag
gtgagggtatggcggtacctgaaaggaaagaccatggtcaatggtgaggttcttctagac
ggcgggaacaaggtgatgatcggtggcttcggggatcctgggatctgcgacaatcaggtt
gccactggtgacacgcgcattttctttgtcaacctggccccggagtacatgtggccggca
cacaagaatgagctgatgctcaattccagcctgatgaggatcaccctgcgcaacctggag
gaggtggagctttgtgtggaagatcatagaatgatcaatgcagacaaacctgttcatttc
acgccagcccagcctcctgacggttgcaggggaatgctttgcggctttggtgcggtgtgt
gagcgtgacgcggctgacccctccaaggctcagtgtgtctgcaagaagacgtgtccgaca
gtggttgcccccgtgtgtggctcggattcatccacctactctaatgagtgtgagctggag
aaagcccagtgcaacacacaacgacgcatcaaggttctgcgcaagggaccctgcgccttg
aaagacccatgcagtgaaatgacctgcagctacggcagcacttgcatccagtcgtcagat
ggccagtcagcaaaatgcatgtgcccgctgagctgcgaaggcaagccggagcaggtggtg
tgtggcagtgacggccaggactatcgcaacgattgtgagctgcacaagaaagcctgcaac
accaagaagaacatccgcctccaattccagggatcctgtgacccgtgcaaagacagcgag
aacaaactgaacgttgtgtgctccgtggagccgcgcagccgcaaggtggtcgccattact
gacacgtcctgcccgcccaccaacgacccgctgtgcgctagtgacggtcagacgtacgcc
agcgagtgtcacatggggcgggtggccatgcagaaggacgtcaaactcaggaagatccat
gcgggtcgctgcaagaaacaagaggagtgcagggaggagtgcgcgttcaacagcgtgtgc
cttgtggagcgtctgggcgtgcgctgctcctgcgagccaatccagtgtgatggcacctac
aagcctctgtgcggcaaggacgggcgcacctacgccaacgactgtgagcgccggcgggcc
gagtgccaggccaaagcccccatccccgtcaagcagcaaggcccatgcgatctggacacg
cccagcccctgcaaggccaagtcctgtgagtttggctctgtgtgcgtggtgaagaacgac
gagcccgtgtgcgagtgccccgacgcctgccctcagacgcccgaccccgtgtgtggcagc
gacggccagagttacggcagccagtgtgaaatgagggccatgggctgcgccctgcagaaa
gagatccacatccaccgcagaggatcatgcgacaaggcgtgtgccaattgttcattcggg
gcaatctgcgatgcgcagtcgggtcgctgcgtgtgcccgcaggagtgtgtggagtcccac
caaccagtgtgcggcagcgacggctccacctataacagcgagtgtgagctccacgtgcgc
gcctgtaccaagcagcttgacctccgggtcgtcgcccagggagaatgcaggacgtgtgga
agcaccgtgtgtgcctggggggcccgatgcattcagaacaagtgtgagtgcccccagtgc
caggcccaggccttctcgccggtgtgtggtagtgatggcgtcacctacgacaacgcgtgt
gagctgggcgtggcgtcctgtgtcctcaaaaggaagattgaggtggccaagcctggcagc
tgcgatgaagagtgtgggtcaggaggatcgggctcaggtgttgagagctgcgaacatgac
aggtgtcgtaccttcggaggctcatgggacgaggatgcggaggaagaccgctgtgtctgt
gaatttgactgccatcgggtgcctcgcaaccaggtgtgtggctcagatgggaggacctac
aacaaccagtgtgagttgaagaaggccaggtgtgacaaacaggagcacctgcagatccag
aatcagggaccctgcacagcagtttctgtgccggaactgacagcgccgcaacactgcagt
caatctgtttatggatgttgccgcgacaacaagacggcagcccttggtgtaggactagcc
ggatgcgctagtacatgccagtgtaacccatatggatcctacaaggccacttgtgaaccg
gccagcggccagtgctcctgtaagcctggtgtcgggggaaagaagtgcgaccgctgtgac
ccgggcttctggaacttccgcggcatcgtcacggagaacttgagcggctgcacaccgtgt
aactgcgactctgtgggttcagtgagggacgactgcgagcagatgtcaggcctctgctcc
tgcaaaacgggagtgaagggcatgaagtgcaacgtgtgccccgacggcagcaagatgggc
atgagcggctgtgtcacaggtgccaatgccccgacctcatgtaaagagctggactgcaag
tttggctcatcatgtgttgagatcaacggtcaagcccactgcgaatgcccctcgcccgac
tgtggcgacaagaacaagaccaaggtgtgtggctctgatggggtgacatacgctgacaag
tgccagctgaggaccattgcctgtaggcaagacaagcacatcacagtggaacacttcggc
cagtgcacagaaagcatcgccgagccggccggccgacccgcctttaatgcccccaccccc
cgcaccaccaccccttccactgcccacgtcaggctcacgtcgccgggccgtttcacttcc
acctccccccaggacgaggaccaagcacaggacccgttggtcttgtatgccgtgcccacc
cccatgcccgaggatgatgacattttcactgaggcctccacgtccgccatggccacggag
ggagcgctcgctgccaaccaccctgtcaccaccccccaccccccacctcacctcaccatc
ccccgccttcccagccacaccagccctggctcttcccatgccaccttcgaggactcaggg
agcggccagcccagtggagatgaccagggggaggaggaggccagcggcatggaggtgtcg
gaggcaagcggagaggagccagttgaccctgaggcggtgggcactaccacccccacggca
gaagaacgctcatcgtgcgacaacacaccttacggctgctgtcctgacggcaaaacggct
tcaagcagcccggagggagccaactgcccctcaaccatgaggttcagtggcttcctgcac
ctggaccaggtggagggccaggaggtcttctacacccctgagatggaggatcccaaatct
gagctgtttggagagacagccaggagcatcgagagtgctctgaatgagttgttccgcaag
tcggaggtgcagaaggacttcatgaccgtccgtgtccgcagcctggctcccagcaactcc
atcctggccttcgtcgaggcccactttgacccagagaccaggtacaacgtggaggacatc
aacggagccttgctcaagcagctgaaagcggctaaagagactgccatcgtggtgaagaaa
ccagaggaagagaatattcagttcaccaactacggcatctcgtccctcccctacttcacc
accaccacagccaccacccccacagccagcaccaccaccagcaccaccttgccgccccca
acgtcctccttcatcacgagccctcgcccctacaccacccgccgcccatataccagccgc
cggacaaccaccaccccggcatctaccactacctcggcgcctgcctccacctccaccgct
tctcccctccccagggccaggcccgtgacccaccacacgaaggcccctcggccctgcgac
tcacacccctgccgccacgggggaacgtgcgaggtcaacggcactgacttcacctgcatc
tgccctgccggccgagggggctccgtctgtgagaaattgatcaagtatttcatcccgtca
ttcgggggtaagtcctacctggcctttgacaccatgaaagcataccacacggtccgcatc
gctatggagttcagggccgccgagatgacgggcatcctgctcttcaacggccaggatggc
aagaaggacttcctgtccctcaccctggtcaacggcaaggtggagctgaaattcaatact
ggctccggcaccgggaccctggtcagtcaggtccagataaagcagggtcgctggcaccag
ctggtggtgacgcggaaccggcgcaacgccatgctgagcgtggacaacgagccccagatc
gaaggctccagcccccccggcaccgacggcctcaacctggacacaaacctgttcatcgga
ggggtgcctgaggacatggtgccagatgcgaaggagaggacctccatcggcaccggtctg
gtgggctgtgtgcgcatgctggacgtcaacaacctggtgtacaacctgcaggaaaagggc
gacaaggtgctgtacggtacgggcgtgggcgagtgtggcaacaatccctgccagcccaac
ccctgcaggaacggtgcctcgtgtcaggtcaaggaggccgagatgttccactgcacgtgt
gtcaacggcttctctggtccaacatgtgccgacagccacaacccgtgcgagcccaacctg
tgccaccgctcgtcccagtgccaggtgctgccagagggagggtacaagtgtgagtgttca
atgggtcgtgaaggacgccactgtgagagagtgacggaaaagaaaggtacctacatgcca
ttctttagcggtgactcttaccttgagctgaaaggattacacacctatggacacgatctc
caccaaaagatcagcatgacagtggtgctcttggccaacgactccaatggcatgatcttc
tacaacggccagaaaactgatggcaaaggggacttcatctccctcgccctcaatgacggc
atcttggagttccgctacgacctgggaaagggccctgcagtcatcaggagtaaagataag
atgaagatgggtgtgtggaacacagtgaatctggagcgggcaagtcgcaagggagaaatt
aacatcaacggaaaggacccagtgagaggagagtcaccgaaatcacgcaagaaccaacac
actgctctcaacctgaaggagtccctgttcgtgggtggtgcccctgatttcagccgccta
gcaagggccgcctcgcttaaagatggcttcaagggggccattcagaagatcacccttatg
ggcacacccatcctgcgtcaggagaatgcgctgcactccagtgatgtggccatgtttgag
ggccacccatgcagccgggagccctgcaacaatgggggccgctgcaatcccgtgctggag
agccacgagtgtgtctgccagcatggcttcaccggcacacaatgtcagaatgccgtcttc
gagaagtccgctggagaaacagagtccattgcctttgatggacggacattcatcgagtac
cacaacgccgtcaccaaaagtgagaaggccctgctagtgaacaagttcgagctcaccatc
aagacagaggccacccagggcctggtgctgtggagcggtaagggcgtggagcgatccgac
tacatcgccctggcagtggtagacgggcgcgtgcagatgacctacgacctgggctccaag
cctgtggtcgtgcgctcaacggtgcgcgtcaacaccaaccgctggatacgcatcaaggcc
agcagagcacttagggacggctctctacaggtgggcaacgaggcggcagtcacagggtca
tcgcccctggcagccacgcagctggacacggacggagcgctctggttgggtggcttggag
gagttggcagttgcccgcagattgcccaaggcctacagcacgggcttcgtgggatgcgtg
aaggacgtggtggtggacggcgtggagctccatctggtggaggatgccctgaacagcccc
aaaatattacactgttctgcagcgatggctaaaaagtag
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