Esox lucius (northern pike): 105016801
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Entry
105016801 CDS
T04894
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
els01002
]
105016801 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105016801 (usp47)
Enzymes [BR:
els01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105016801 (usp47)
Peptidases and inhibitors [BR:
els01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105016801 (usp47)
Ubiquitin system [BR:
els04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105016801 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
105016801
NCBI-ProteinID:
XP_019911241
LinkDB
All DBs
Position
LG02:24469502..24498337
Genome browser
AA seq
1386 aa
AA seq
DB search
MEMVPSEENQLVTLPKEGVCCLLQTENAAEEPRVLCIVQDTTNAKTVNERLTLNLPASTT
LSKLFNEVAHKAGYVSGTFDLAWGKTTDVAPLDLSSEMSLTESGFEAGKRNFLQLTDKDG
EQPQLASDDLGTADSSGLDDSSHERLMGPLPRDCTVGCSSDYSSPSYSYSSILNKSDTGY
VGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSK
KRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQQQFSSITADLINQL
YQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYCSVEEALQAFVQPETLDGAN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMSFPEELDMSPF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDGVDEGICLDSASSTERVLKPKS
SLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQEDIRKTYGGSSGNR
GYYSSAFASSTNAYMLIYRLKDPSRNAKYLDCDNFPEHIKHLVQREKESEEQEKRQKEIE
RNTCKIKLFCMHPVKMMMMENKLEVHKDKTLREATEMAYKLMDINGVVPMDCCRLVKYDE
FHEYLERSYEGEEDTTMGQLLGGVKSSYMFDLLLETRRPEQVFQPYKPGEVMVKVYVLDL
NTETIAPPVSLRAYLNQSVTEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKTLKA
EGFFRSNKVFVESSESTDNEVAFTDSLLWKLLDRHANTIRLFVSLPEQSPGIHRTICQKV
GCDPEESLENSKGSRKSVDAILEESTEKLKNLTLQQQQGSSTSDSQKSSDSSDFEHIKSP
SPSQEPNSVSSVSAVVAVDNRELENRIQAASEGCGAVSGGASSDLETQFTGEERSDSEVN
NDRSTSSVDSDILSSSHSSDTLCNADSGPIQLVNGLDSHSITSSRRSKAREGKKETWDTA
EEDSGTDSEYDENGRSKTDSQYLYFRSEPYAQDDGSGEGQKCLLVHVDKRITLAAFKQNL
EPFVGITSSQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQ
LLVNDAEPCKFLVDTVFAKGMTVKQSKEELLPQLRDQCKLDLSVDRFRLRKKTWKNPGTV
FLDYHIYEEDINISSNWEVFLEVLDGPEKMKSMSQLAVLTRRWTPAQMKLEPFQEVVLES
STVEELNEKLSEISGIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYIC
DDGAVVFYRDNTEEPMELSEDERNELMKRESSRLLKTGHRVSYSPRKEKALKIYLDGGPA
KDPGQD
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagagaaccagctcgtaacgttacccaaagagggtgtgtgc
tgtctcttgcagacagagaatgcagcagaagagcccagggtgctgtgcatagtccaggac
acaaccaatgctaagacggtcaacgagaggctcaccctcaacctaccagcttccaccacc
ctttccaaactctttaacgaggttgcccacaaagccggctatgtcagtggcacctttgac
ctggcatggggcaagaccacagacgtggcaccacttgacctcagcagtgagatgtccctc
actgagtccggcttcgaggccgggaagaggaacttcctccagctcacagacaaagacgga
gagcagccacagcttgcatcggacgacctggggacagcagacagcagtggcctggatgac
agctcccatgagcgtttaatgggcccactgcccagagactgcacggtgggttgcagcagc
gactatagcagtcccagctactcctactcctccatactcaacaaatctgacacagggtat
gtaggtttggttaaccaggccatgacctgctatttgaacagccttctacaaacactgttt
atgactccagagttcagaaatgcgctgtacaactgggagtttgaggagtcggaagaagac
ccagtcaccagtatcccttaccagctacagagactgttcgtgctcctgcagaccagtaag
aagagggcaattgagaccaccgacgtgacccgcagctttggatgggacagcagcgaggcc
tggcagcagcatgacgttcaggagctgtgcagggtcatgttcgatgccttggagcagaaa
tggaagcagacagagcagcagcagttttcttcaattacggctgacttgattaaccagctg
tatcaggggaagctgaaggactatgtgcgctgtctggagtgtggctacgagagttggagg
attgacacatacctggatatcccgctggtcatccgaccctttggggccagccaggcttat
tgcagtgtggaggaggctctccaggccttcgtccagccagagactctggatggggcaaac
cagtacttctgtgagcgctgcaagaaaaaatgtgacgcccgtaagggcctgaggtttctg
cactttccctacttactgaccctgcagttaaaacgttttgactttgactacaccactatg
caccgcatcaaactcaacgatcgcatgtctttccccgaggagctggatatgagtcctttc
attgatgtggaggatgagaaatctcctcagactgagagctgcactgacagcggggcagag
aatgagggtagttgccacagtgaccagatgagcaacgacttctcgacagacgacggtgtg
gatgagggcatctgtctggacagtgccagcagtactgagagggttctgaagccaaagagt
tccttgacctttgagctcttctcggtcatggtccattcgggcagcgctgcgggtggccat
tactacgcctgtatcaaatctttcagcgatggccagtggtacagtttcaacgaccagcac
gtcagcaagatcacccaggaagacatcaggaagacatatggggggtcctcagggaacaga
ggctattactccagtgcctttgccagctctacaaatgcttatatgctgatttataggttg
aaagacccttcaaggaatgcaaagtatctggattgtgacaacttccctgagcacatcaag
cacctggtccagagggaaaaggaatctgaggagcaggagaaaagacaaaaggagattgaa
cgtaatacatgcaagatcaagcttttctgtatgcatcccgtgaagatgatgatgatggag
aacaagcttgaagtgcacaaggacaagacactccgagaggcaacagagatggcttacaag
ctcatggacataaatggagtggtcccaatggactgctgccgtttggttaagtacgatgag
ttccacgagtacctggagcgctcatatgagggtgaggaggacaccaccatggggcagctg
ctggggggggtcaaatcctcttacatgtttgacctgctgctggagacccgcaggccggag
caagtcttccagccatataagcccggagaggtgatggtaaaggtttacgtgttggatctg
aacactgagaccattgcccctcctgtcagcctcagggcctacctgaaccagtcggtcact
gagttcaagcagcttattgcacaggccacagggctctcggcagaaaccatgcgtgttgtc
ctggagcgctgctacaatgaccttcggcttctctacgtgcccaacaagacactgaaagca
gagggtttcttcaggagcaacaaggtttttgttgaaagctctgaatccacagataacgaa
gttgctttcactgattctctcttatggaaactgctggatcgtcatgcaaacacaatccgc
ctgtttgtctcgttgcctgaacagtcccctggcatccacagaactatttgccaaaaagta
ggctgtgacccagaggagtccttggagaattcaaagggcagcagaaagtctgtagacgcc
attttggaggagagcacagagaagctgaagaatctaaccctccagcagcagcagggctcc
agcaccagtgatagccagaagagctcagacagcagtgactttgagcacatcaagtcccct
tccccctctcaggagcccaactctgtttcctctgtatctgccgtagttgcagttgacaac
cgcgagctggagaaccggatccaggcggccagtgaagggtgtggcgctgtgagcggtggg
gcctcctctgacctggagacccagttcactggagaggagcgctctgactctgaggtgaac
aacgaccggagcaccagctcggtggacagtgacatcctgagctccagccacagcagtgac
acgctgtgcaatgccgacagtggccctatccaattggtcaacggcctggactctcacagc
atcaccagcagtcgccgctccaaggcccgcgagggaaaaaaggagacatgggacaccgct
gaggaggacagcggcacagacagcgagtacgacgagaacgggaggagcaaaactgactcc
cagtacctctatttcagatcagaaccatatgcgcaggatgatggctctggtgaaggccag
aaatgtctgctggtccacgtggataaaaggataactctagcagcattcaaacagaacctt
gagcccttcgtgggcatcacctcttcccagttcaaggtgttccgtgtctatgccaacaac
caggagtttgagagtgtacggctcaacgaaaccctctcctccttctctgatgacaacaag
attaccattcgattaggcagagcactgaagaagggtgaatatcgggtgaaagtgtaccag
ctactggtgaatgatgcagagccctgtaagttcctggtggacacagtgtttgccaagggt
atgactgtgaaacagtctaaagaagagctgttgcctcagttgagagaccaatgcaagctg
gacctcagtgttgaccggttccgcctgaggaagaagacgtggaagaatcccgggacagtg
ttcctggattaccacatttacgaggaggacatcaacatctccagcaactgggaggtcttc
ctagaagtcctagatggtccggagaagatgaagtccatgtctcagcttgccgtgctgacg
cgtcgctggactcctgctcagatgaaattggagcccttccaggaagtggttctagagagc
agcactgtggaggaactcaatgaaaagctcagtgaaataagtggcattcctcttgaaaac
ctggagtttgccaagggacgtggaacgtttccttgtgatatttcagttttggagatccac
caagatcttgactggaaccccaaagtgtctactctgaatgtgtggcctctgtacatctgt
gatgatggtgctgtggtcttctacagggacaacacagaggagcccatggaactgtctgaa
gatgagcgcaatgagctgatgaaaagggagagcagccgcctgctgaagacaggccatcgg
gtcagttactcaccacgcaaggagaaggcccttaagatctacctggatgggggcccagcc
aaggacccagggcaggactga
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integrated database retrieval system
