Esox lucius (northern pike): 105017995
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Entry
105017995 CDS
T04894
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
els03041
]
105017995 (ddx1)
03016 Transfer RNA biogenesis [BR:
els03016
]
105017995 (ddx1)
Enzymes [BR:
els01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105017995 (ddx1)
Spliceosome [BR:
els03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105017995 (ddx1)
Transfer RNA biogenesis [BR:
els03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105017995 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
DUF5766
TsaD
Motif
Other DBs
NCBI-GeneID:
105017995
NCBI-ProteinID:
XP_010881370
UniProt:
A0A3P8ZLV0
LinkDB
All DBs
Position
LG18:complement(1718129..1727281)
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AA seq
741 aa
AA seq
DB search
MAAFSEMGVMPEIAQAIEEMGWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVFETLKDQQEGKKGRAAVKTGGPVFNKWQMNPYDRSTAFAIGPDGLCCQSREFKEWH
GCRSTKAITKGKYYYEVTCHDQGLCRIGWSTSQASLDLGTDKYSFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDLDNGHMSFSKNGMDLGLAFDIPAHLKNQPFFASCVLKNAELKF
NFGGEEFKNAPKTGFVALQQAQDGHVVKSSQTGTAKMSEVKASSSGPKALIIEPSKELAE
QTLNNVNLCKKYVENPKLRDLLIIGGVPAKDQLSTLEHGVDIVVGTPGRLDDLISTGKLT
LSQVRFLVLDECDGLLTAGYTDFIMRVYNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPETVHHVVVPVNPKVDRSWEHLDRKKHIQTDEVHAKDNTRPGT
NSSEMWSEAIKVLKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDKKGHQ
FSCVCLHGDRKPNERKTNLERFKKQEVKFLICTDVAARGIDIHGVPYVINVTLPDEKQNY
VHRIGRVGRAERMGLAISLVAMEKEKVWYHTCANRGRGCYNTRLKEDGGCTIWYNEKELL
SDVEEHLKCTVTQCEPDIKVPIDEFDGKVTYGKRRATGAGVHSGHVDALAPTVQELANLE
REAQTSFLRLGYLPNQLFKAF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttctgaaatgggtgttatgcctgagatcgcccaggctatcgaggagatg
ggatggctcctccctacggacatccaggcagagtcaatccctctgattttgggaggcgga
gatgtcctcatggcggctgagactggcagcgggaagacaggggctttcagtatcccagtg
atccagattgtctttgagactttgaaggaccagcaggaagggaagaaagggagggctgcc
gtgaagacaggtggaccagtcttcaacaaatggcagatgaacccatatgaccgaagcaca
gcttttgccattgggccggacggactgtgttgccaaagcagggagttcaaggaatggcat
ggatgtcgctctaccaaagctatcaccaagggaaagtactactatgaggtgacttgtcat
gatcagggactgtgccggatcggttggtccaccagccaggcatctctggacttgggtact
gataagtacagttttggctttggaggaactgggaagaaatcgcacaacaaacagtttgac
agctatggagaggagttcaccatgcatgacaccataggatgctacctggacctcgacaac
ggacacatgtccttctccaagaatggtatggatttaggcttggcgtttgatatcccagct
catctgaagaaccagccgttctttgcgtcctgtgttctcaagaatgcagagctgaagttt
aattttgggggggaggagtttaagaacgctcctaaaacaggcttcgtagcgctccaacag
gcccaggatggacatgtggtcaagtccagccagacaggtactgcgaagatgtcggaggta
aaagcctcgtccagtggtcccaaggctctgatcattgagccctctaaagagctggctgaa
cagacactcaacaacgtgaacctgtgtaagaaatacgtggaaaaccccaaactcagagat
ttgctgatcatcggcggtgtccctgctaaagaccaactgtccactctggaacatggcgtg
gacatcgtggtgggaaccccaggacgtttggatgacctcatctctactgggaaactcacc
ttgtcccaagtccgcttcctggttctggatgagtgtgatgggctgctgactgccggctac
acagacttcatcatgcgagtctataaccagataccccaagtcacctccgatggcaagaga
ctgcaggtgatcgtttgctcagccacgctacactcctttgacgtgaagaagctgtctgaa
cgcatcatgcacttccccacctgggtggacctgaagggggaggactctgtcccggagacc
gtccaccacgtagtcgtcccggtcaaccccaaagtggaccggagctgggagcatctcgac
cgcaagaaacatatccagactgatgaggtccatgctaaagacaacaccagaccaggaacc
aactcctcagagatgtggtcggaggccatcaaggtgttgaagggggagtacaccgtcagg
gccattaaagaacacaagatggaccaagccatcatcttctgtcgcaccaagatagactgt
gacaacatggagcagtactttatacagcaaggaggaggcccagataaaaaaggacaccag
ttttcctgcgtctgtctccatggtgacaggaagcccaatgaacgcaagaccaacctggag
cggttcaagaaacaagaagttaaattcttgatctgcacagacgtggcggccaggggcatc
gacatccatggggttccctatgtgatcaacgttacgctgccagatgagaagcagaactac
gtccatcgcattggccgagtggggagagccgagaggatgggcttggctatctcccttgtt
gccatggagaaagaaaaagtgtggtatcatacgtgtgcgaaccggggcaggggctgttac
aacaccagactgaaggaagatggaggatgtaccatctggtacaacgagaaggagcttctg
tcagacgtagaggagcatctgaaatgcaccgttactcagtgtgaacctgacatcaaggtc
ccaatcgatgaatttgatgggaaggttacctacggcaagcgcagagcaacaggagcggga
gtccacagtggacatgtggatgcattagctcccacagttcaggagttagccaacctggag
agagaagctcaaacctccttcctccgtcttgggtacctgcccaaccagctgttcaaagcc
ttctaa
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