Esox lucius (northern pike): 114828770
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Entry
114828770 CDS
T04894
Name
(RefSeq) general transcription factor IIF subunit 1-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
els
Esox lucius (northern pike)
Pathway
els03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114828770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
els03021
]
114828770
Transcription machinery [BR:
els03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
114828770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
114828770
NCBI-ProteinID:
XP_028979665
LinkDB
All DBs
Position
LG11:23339773..23348502
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AA seq
541 aa
AA seq
DB search
MTSLGGSSSSSTEYTVRVPKNNSKKYSIMAFNSGDKVNCSTWTQARMERDMSNRRMYGGE
ETEEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKINGKAGKRFKGQKKGGVTE
NASYYIFTQCPDGAFEAFPVNGWYNFVPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGPDDEDEEGEKGGKKKKKKKGARGGDLRIHDLEDDLELSSDESDSSREEGDNK
PKKKESVAKGKGKKKKKKRGSDSEANEDSDDGDYEGLEVDYMSDESSSEEEAGEEKAKSN
KEDGPKGIDEASDTEDESEEEKQNEEEGKEEEEEEEGKKTPVQMEKKKKRDSSGESDTSE
DSDIDGEAASALFMVKKRTPPKRGGGRGSGGSSRTGSRPGTPSIDSASTSNTLRAAASKL
EQGKRQVLGGSSDSPAAKRLKMEPGSTATTTQSPAPSGKSTPQPPSGKSTPSSSDVQLTE
EAVRRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLT
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactgggtgggagcagttcctcttctacagagtatacagtccgggtccccaag
aacaacagtaagaagtacagcatcatggcatttaactctggggacaaagtcaactgctcc
acctggacccaggctcgtatggagcgggacatgagtaacaggaggatgtatggtggggag
gagactgaggagggggcggcgggcagtgagtttggaaagaagcagcgtgaggaggcgcgc
aggaagaagtttggcatcgtcaccagggagttcaaggtggaggaccagccctggatcctc
aagatcaatggcaaggcagggaagagatttaagggtcagaagaaagggggcgtgaccgag
aacgcgtcctactacatattcacccagtgtcctgacggtgcctttgaggctttccctgtg
aacggctggtacaactttgtcccccaggccaaacaccggacactgactgccgaggaggcg
gaggaggagtggggcaggaggaacaaggtggtgaaccacttcagcatcatgctccagagg
cgtctccgggagcaggagagagggccagatgacgaagacgaggagggcgagaaggggggt
aagaaaaaaaagaagaaaaagggagcaagaggaggtgaccttcgtatccacgacctggag
gacgacctggagctgagcagcgacgagagcgacagcagcagagaagaaggagacaacaag
ccgaagaagaaggaatcagttgcaaagggcaaggggaagaagaagaagaagaagaggggg
agtgacagcgaagcaaatgaggacagtgacgatggagactatgagggactggaggttgat
tatatgtcagatgaaagcagctccgaggaagaggccggcgaagagaaagccaagtccaat
aaggaggacggccctaaaggaattgatgaggcctcggacactgaggacgagagtgaggag
gaaaaacagaatgaagaagagggcaaagaggaggaggaggaagaggaagggaagaagacc
ccagtccagatggaaaaaaagaaaaagagagacagtagcggcgagtcagacacttcagag
gacagcgacatcgatggagaggcagcctcagctctctttatggtgaaaaagcgtactcct
cctaagcgcggtggtgggcgtggctctggtggtagctccaggactggcagtcgccctggg
acaccatccatagactccgcctccacctccaacacactccgtgctgctgccagcaaactg
gagcaaggtaagagacaggtactgggtggtagctcagactctccagctgccaagaggctg
aagatggagcctggaagcacagcaactaccacccagagtcctgccccctcagggaagagc
acaccacagcccccctcaggcaaatcaacacccagctccagtgacgtccagctgaccgaa
gaggcagtacgtcgctacctaatccgcaagcccatgaccaccaaggacttgctgaagaag
ttccagaccaagaggacaggcctgagcagcgagcagaccgtcaacgtcttggctcagatc
ctaaaacgcctcaaccccgagaggaagaacgtcaacgacaagatgcacttctacctaaca
gaatga
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