Escherichia coli UM146: UM146_08445
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Entry
UM146_08445 CDS
T02000
Name
(GenBank) nucleotide excision repair endonuclease
KO
K05984
excinuclease Cho [EC:3.1.25.-]
Organism
elu
Escherichia coli UM146
Brite
KEGG Orthology (KO) [BR:
elu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elu03400
]
UM146_08445
DNA repair and recombination proteins [BR:
elu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UM146_08445
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Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
ADN71078
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Position
complement(1785416..1786303)
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AA seq
295 aa
AA seq
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MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSINIRSR
VLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQ
LNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEPLSRGRA
CFRSALKRCAGACCGKESHDDHALRLRQSLERLRVVCWPWKGAVALKEQHPEMTQYHIIQ
NWLWLGAVNSLKEATTLIRAPAGFDHDGYKILCKPLLSGNYEITELDPVNDQQAS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtggtacggcgtttaacttctccgcggctcgaatttgaagctgcggcaatttatgaatat
cccgaacatttacgttcattccttaatgacttacccacccgacctggggtgtatctgttt
catggcgaaagtgacaccatgccgctctatatcggcaaaagcattaacatccgcagccgc
gtcctttctcatttacgtaccccggatgaagccgccatgctacggcaatcccgacgcatc
agctggatatgtaccgccggtgaaatcggcgctctgctccttgaagcgcgattaatcaaa
gaacaacagccactgtttaataaacgcttgcggcgcaatcgccagctctgtgccctgcaa
ttaaatgaaaagcgcgtcgatgtggtgtatgccaaagaggtggatttttcacgagccccc
aacctgtttggcctgtttgccaataggcgcgcagctttgcaagcattacagaccatcgct
gatgaacaaaaactttgttatggcctgttgggactggagccgttaagtcgcggtcgtgca
tgttttcgttcagcgctaaaacgttgcgccggagcatgctgcggtaaagagagccatgac
gatcatgcgctacgtttgcgccagtctctggaacgtttacgagtcgtttgttggccgtgg
aaaggtgcggtagcgctgaaagaacagcacccggaaatgactcaatatcatattattcaa
aactggctgtggctgggggcggttaattcgctgaaagaagcgacaacgttaattcgggca
cccgccgggtttgatcacgacggttataaaattctttgtaagccgctgctttccggtaac
tatgaaattactgaacttgatccggtgaatgaccagcaagccagttga
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