Escherichia coli UM146: UM146_13755
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Entry
UM146_13755 CDS
T02000
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
elu
Escherichia coli UM146
Pathway
elu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
elu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UM146_13755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elu03400
]
UM146_13755
DNA repair and recombination proteins [BR:
elu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UM146_13755
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UM146_13755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
IF2_N
DUF1844
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADN72116
LinkDB
All DBs
Position
complement(2836932..2838953)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR
FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttctggcgatcagccggaggcg
attcgacgtctcgaagaggggctggaagatggcctggcgcaccagacgttacttggcgtg
actggctccgggaaaaccttcaccattgccaatgtcattgctgaccttcagcgccctacc
atggtacttgcgcccaacaaaacgctggcggcccagctgtatggcgaaatgaaagaattc
ttcccggaaaacgcggtggaatatttcgtctcctactacgactactatcagccggaggcc
tatgtaccgagttccgacacctttattgagaaagatgcctcggtaaacgaacatatcgaa
cagatgcgtttgtccgccaccaaagcgatgctggagcggcgtgatgtggttgtggtggcg
tctgtttccgcgatttatggtctgggcgatcctgatttatatctcaagatgatgctccat
ctcacggtcggtatgattatcgatcagcgcgcgattctgcgccgactggcggagctgcaa
tacgctcgtaatgatcaggcattccagcgcggtactttccgcgttcgtggtgaggtgata
gatatcttcccggcagaatcggatgacattgcacttcgcgtggaactgtttgacgaggaa
gtggaacgattgtcgttatttgacccgctgaccgggcagattgtttccactattccacgt
tttaccatctacccgaaaacgcactacgtcacgccgcgcgagcgcatcgtacaggcgatg
gaagagatcaaagaagaactggccgccagacgcaaagtgctgttggagaacaacaagttg
cttgaagagcagcggctgacccagcgtacccagtttgatctggagatgatgaacgagctg
ggctactgttccgggattgagaactactcgcgcttcctctccggtcgtggaccgggtgag
ccaccgccgacgctgtttgattacctgcctgccgatgggctgttggtcgtcgatgaatct
cacgtcaccattccacaaattggcggcatgtatcgcggtgaccgggcgcgtaaagagact
ctggtggagtacggcttccgcctgccatcagcgctggataaccgtccgctgaaatttgaa
gagttcgaagcattagcgccgcaaaccatctatgtttcggcgacgccgggtaattacgag
ctggaaaaatccggtggcgatgtggtggatcaggtggtgcgtccaacaggcttactcgac
ccgattatcgaagtgcggccagtggcaacacaggtggatgatcttctttcggagattcgt
cagcgagcggcaattaacgaacgcgtactggttacaactctgaccaagcggatggcggaa
gatctcactgaatatctcgaagaacacggtgagcgcgtgcgttatcttcactcagatatc
gacaccgtcgaacgtatggagattatccgcgacttgcgtctgggtgagttcgacgtattg
gtagggatcaacttactgcgcgaaggtctggatatgccggaagtttcgctggtggcgatc
ctcgacgctgacaaagaaggcttcctgcgttccgaacgttcgttgatccagaccattggt
cgtgcggcacgtaacgttaacggtaaagcgattctctatggcgataagatcaccccatca
atggcgaaagcgattggcgaaaccgaacgtcgccgcgagaaacagcagaagtacaacgaa
gaacacggcattacgccgcaaggcttgaacaagaaagtggtcgatatcctggcgctgggg
cagaacattgccaaaaccaaagcgaagggcagaggaaaatcgcgcccgattgttgaaccg
gataatgtgccgatggatatgtcgcctaaagcgttacagcagaagatccatgaactggaa
gggttgatgatgcaacacgcgcagaatctggagttcgaagaagcggcgcaaattcgtgac
cagttgcatcagttgcgtgagctgtttattgccgcgtcgtga
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