Ereboglobus luteus: CKA38_07990
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Entry
CKA38_07990 CDS
T09773
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
elut
Ereboglobus luteus
Pathway
elut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKA38_07990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elut03019
]
CKA38_07990
Enzymes [BR:
elut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CKA38_07990
Messenger RNA biogenesis [BR:
elut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CKA38_07990
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AWI09187
UniProt:
A0A2U8E2U2
LinkDB
All DBs
Position
complement(2118183..2119715)
Genome browser
AA seq
510 aa
AA seq
DB search
MIRKIMSKLRKALAPSSKKPASSKAAGKANSKTQQRGRNTKSRHKTDGSPAPAQQRKGRS
QEHRGTRNAEPRHRGKGGALQRGGPKPKREAVYEPPLRSGPPKQIAEVPPQDTPFSKLGL
NDRIAYAVAQKGYVEPTPIQAQAIPHVLAGRDVTGSAQTGTGKTAAFALPILQRLGSHGR
LRCLVLEPTRELALQVEEAFKEYSEYTDLDVTIVYGGVGYGKQRDDLQRGVDILAATPGR
LLDHMEQGTVNLNSIEILVLDEVDRMLDMGFLPDVKRIVQKCPNARQTLFFTATLPPEIA
QLASWALNDPVEVKIGAQRSPAETVSHAFYPVVASQKADLLDELLKRTDYHSIIIFSRTK
FGADRIAGRLRGAGRKVGVLHSDRNQRERLEALSGFKSGKYEILVATDIAARGLDIADVS
HVINYDVPENPEDYVHRIGRTGRAQKTGDAFTLVTEDDVRDARSIERFINSSIERKKLDG
FNYIYSALFDEAAQTAATPPKATSRLRRGR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgataagaaagatcatgtcgaagctgcgcaaagcactcgcgccttcgtccaagaaaccg
gcttcctccaaggccgccggcaaagccaattccaaaacgcaacagcgtggccgcaacacc
aagtcccgtcacaaaacggacggttcccccgcgcccgcgcaacaacgcaaaggccgctcg
caggagcatcgcgggacgcgcaacgccgagccccgccatcgcggcaagggcggcgcgctg
caacgcggaggccccaagccaaaacgcgaggccgtttacgaaccgcccctgcgcagcggc
ccgccaaaacaaatcgccgaggtgcctccgcaggacactccgttttccaaactaggcctc
aacgatcgcatcgcctacgccgtcgcgcaaaaaggttatgtcgaacccacgcccatccag
gcgcaggccatcccgcacgtcctcgccggacgcgacgtgaccggctccgcgcaaaccggc
acgggcaagacggccgcgttcgcgctgcccatcctgcaacgcctcggctcgcacggacgc
ctccgctgcctcgtgctcgaacccacgcgtgaactcgcgctccaagtcgaggaagccttc
aaggaatacagcgaatacaccgacctcgacgtgacgatcgtctatggcggcgtcggctac
ggaaaacagcgcgacgacctccagcgcggcgtcgacatcctcgccgcgaccccgggccgc
ctgctcgaccacatggagcaaggcaccgtgaacctcaacagcatcgaaatcctcgtgctc
gacgaagtggaccgcatgctcgacatgggcttcctgcccgacgtgaaacgcatcgtgcaa
aaatgccccaatgcccggcaaacgctcttcttcaccgccacgctcccgcctgaaatcgcg
cagctcgcctcgtgggcgctgaacgatcccgtcgaggtgaaaatcggcgcgcaacgctcg
cccgccgaaacagtgtcgcacgcgttttatcccgtcgtcgcctcgcaaaaagccgacctg
ctcgacgaactgctcaagcgcaccgactaccacagcatcatcattttcagccgcacaaag
tttggcgccgaccgcatcgcgggccgccttcgtggcgcgggccgcaaggtcggggtgctc
cactccgaccgcaaccagcgcgaacgccttgaggcactctcgggattcaagtcagggaaa
tacgaaattctcgtggccaccgacatcgccgcgcgcggcctggacatcgccgacgtgtcg
cacgtgatcaactacgacgtgcccgaaaaccccgaggactacgtgcaccgcatcggccgc
accgggcgcgcccaaaaaaccggcgacgccttcacgcttgtgaccgaggacgacgtgcgc
gacgcgcgctcgatcgaacgcttcataaactcgagcatcgagcgcaaaaaactcgacggc
ttcaactacatctactcggcgctgttcgacgaggccgcccaaaccgccgccactccgccc
aaagccacaagccgtctgcgtcgcggacggtaa
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