Epinephelus lanceolatus (giant grouper): 117246158
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Entry
117246158 CDS
T07331
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like
KO
K12006
tripartite motif-containing protein 16
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117246158
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117246158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
U-box
NRN1
Motif
Other DBs
NCBI-GeneID:
117246158
NCBI-ProteinID:
XP_033465801
LinkDB
All DBs
Position
20:complement(25060440..25067179)
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AA seq
567 aa
AA seq
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MAGKQQHQQEEQRGVELDQDQFCCSVCLDLPKEPVTISCGHSYCRRCIEGCWDQEEERGQ
YSCPQCRETFSPRPVLRRNNMLAEVVEKLKKSSTQASLPAAAACAGPADIVICDFCCETS
QNKATMSCLTCLASYCPAHLKPHYSVPVLKKHQLVSATIPLQEKMCTKHNKLMEVYCRTD
KQLVCTLCVIDEHKGHTIISVSVQKAETEKRLALSQNKVQERIRQREEELKELSQAEENV
KSCAQTALQDCDKIFAELISSMQRRCREVKELIRDQEKTAVAQAEKQQLQLEEEISKLRR
RDAELEQLSHADDLVHMIQTFPSLSTSCDSPDFSPGAGPVRSFRDVTDCVSELRDKLERV
MKDTWPRISATVSYIDFSLPPVPKTRDEFLDYCCPLTLDGNSNYPYLHLIEDNRRVRPSP
TTYSAHSDRFTKFPQVLCREGLTEQCYWEVEWHARTLSAAVAYNNIHRTSDESRFGNDDK
SWCLECTENGYLFRHNNVVTRVSGPRSERIGVYLDYKSGTLCFYHVPYPMILLHKVQATF
TKPLYPGLGLEYEWYDIGVFAQLAKLW
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaagcaacaacatcagcaagaggagcaacgtggtgttgagctcgaccaggat
cagttctgctgttctgtatgtctggacctgccaaaagaaccagtcaccatttcctgtgga
cacagttactgcagacgatgtattgagggctgttgggaccaggaagaggagaggggacag
tacagctgccctcagtgcagggagaccttcagtccaaggcctgttctgaggaggaacaac
atgctggctgaggtggtggagaagctgaagaagtcaagcacccaggcttctctccctgca
gctgcagcctgtgccggaccagcagacattgtcatctgtgatttctgctgtgagaccagc
caaaacaaagccacgatgtcttgcctgacgtgcttggcatcttactgtccagcccacctc
aagcctcactacagtgttcctgtgttgaagaagcaccagctggtgtcagctacaatccca
ctgcaggaaaagatgtgtacaaagcacaacaagttgatggaggtctactgtcgcacagac
aagcagcttgtttgcactctgtgcgttatagatgagcataaaggccacacaataatttct
gtgtcagtacagaaggctgagacagagaaacgattggctttgagtcaaaataaagtccag
gagagaatcaggcagagggaggaggagctgaaggagctgagccaagctgaggagaatgtc
aagagttgtgcccagactgcgctgcaggattgtgacaagatcttcgccgagctgatctcc
tccatgcagagaagatgtagagaggtgaaggagctgatcagagaccaagagaaaactgct
gtggctcaggctgagaagcagcagctgcagctggaggaggagatcagcaagctgaggagg
agagacgccgagcttgaacagctgtcacacgctgacgatcttgtccatatgattcagact
ttcccgtctctctccacttcctgtgactctccagacttttcgccaggtgctggtcctgtg
cgctccttcagagatgtgactgactgcgtgtctgagctgagagataaattagagagagtc
atgaaggacacatggcccaggatctctgccacagtctcttacattgacttctccctgccg
ccagtaccaaaaaccagggatgagtttttagactattgctgtcccctcacactggatggg
aattcaaactacccgtatctccacctgatagaagacaaccgcagggtgaggccttcaccc
accacgtattctgctcactcagacaggttcactaagtttccacaggtgctgtgcagagag
ggtttgacagagcaatgttactgggaggtggagtggcatgctcgcactctgtctgcagca
gtggcatacaacaacatccaccgcacatcagacgagtcacgttttgggaacgatgacaag
tcctggtgtttggagtgcacagaaaatggttacttgttccgtcacaataacgtagtaacg
agggtgtcaggccctcgctccgaaaggattggagtgtatctggactataaatcaggcact
ctgtgcttttatcatgtcccctacccaatgatcctgctccacaaagtccaggccacattc
accaagcctctgtatcctgggcttgggctggaatatgaatggtatgatattggagtgttt
gcacagttggctaagttatggtag
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