Epinephelus lanceolatus (giant grouper): 117254053
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Entry
117254053 CDS
T07331
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ely01002
]
117254053 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117254053 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117254053 (usp13)
Enzymes [BR:
ely01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117254053 (usp13)
Peptidases and inhibitors [BR:
ely01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117254053 (usp13)
Ubiquitin system [BR:
ely04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117254053 (usp13)
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117254053 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA
zf-UBP_var
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
117254053
NCBI-ProteinID:
XP_033477919
LinkDB
All DBs
Position
5:26229828..26280500
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AA seq
828 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWMNLTDGAVYCGKWFFDGSGGNGHALEHYKETKYPLAVK
LDTITPDGADVYSFEEEEAVLDPHISDHLSHFGIDMLQMQKRTENGHHTDNNARPRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYFGTVMQILFSIPDFQRMYVGNLQRIFDYSPL
DPSQDFATQMHQQRGVSPRMLKALVSRGHPEFSSNRQQDAHEFLLHMINLVERNSTGSEN
PSDVFRFLVEERVQCCQTRRVRYTQRVDYCIQLPAPIEAATNREELLAYEAKRRDAEENM
RAPPEPVRARIPFTACLQAFTEPENVPDFWSSALQAKSAGVKTSRFASFPEYLIVQIKKF
TFGVDWVPKKLDLAIDVPDFLDLSRLRASGLQASEEELPDLMPPIVLPEDTRDNSMGSSD
SPEIDEAAVMQLAEMGFPLEACRKAVYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMM
DPGPSTSDSPMGATPLANSPPEESIAILTSMGFPRAHSIQALKATNNNLERALDWIFTHP
EEEESDALSDMADTEPNDNAFSNANSHSDSTLSPDRDTSGPRVKDGPGRYELFAFISHMG
ASTMSGHYVCHIKKEGRWVIYNDHKVCLSERPPKDLGYIYFYHRLSSS
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctcggagagctgctggtcccatacatgcccaccatcagagtgcccagg
actggagacagggttttcaagagcgagtgcgccttttccttcgactctcccgagtcagag
ggaggcctgtatgtgtgtatgaacacattcctgggcttcggacgggaacatgtggagaga
cattatcgcaaaacaggacagagcgtttacatgcacctcaaacggcatgtcaaagagaaa
gccacaggagctgcaggaggtgccatccccagacgaagaaatggaaaagtgtttctagat
ttagagctaaaccgtgattttaacggcgaggactatgaatatgaagacgaggccaagctc
gtcatttttccagaccacttcgagatccccttaccaaatattgaggagttgcccgctctg
gtgaccatcgcctgtgatgcagtgctcaacgcaccatcagcctacaagaagcaggagcct
gaatcctgggaggaggagatccaggtgtccagacatgccaggagcctcagacagctggat
aatggggtcaggatcccacccagtggctggaagtgtcagaagtgcgagatgagagaaaac
ctgtggatgaacctgacagatggagccgtgtactgtgggaagtggttctttgatgggagt
ggaggaaacggtcacgctctggagcactacaaagagaccaaataccccctggctgtcaaa
ctggacaccatcactccagacggagcagatgtctactcatttgaggaggaggaggccgtg
ttggacccccacatatcagatcacttgtcacactttggaatagacatgctacagatgcag
aaaagaacagagaatggccaccacacagacaataacgcccggccgcgggtcagtgaatgg
gaggtgatccaggagtcgggcatgaagctgaaagcggtgtttggctctggttacacaggc
atcaaaaacctgggcaacagctgctacttcggcacagtgatgcagatcctcttcagcatc
cctgacttccagaggatgtatgtgggtaatcttcagaggatatttgactattcacctctc
gaccccagccaggacttcgccacacaaatgcaccagcagaggggcgtctctccccggatg
ttaaaggccctggtcagcaggggacacccagagttttcctccaacagacaacaagacgcc
cacgagttcctcctgcacatgattaatttggtggagaggaacagcacaggctcggagaat
ccaagcgacgtcttccgcttcctggtggaggagcgagttcagtgctgtcagacacgccgg
gttcgttacactcagcgggtggactactgcatccagctgccagctcccatcgaggcggcc
accaatcgagaggagctgctggcatacgaggccaagcggagggacgctgaggagaacatg
cgggctccccctgagccggtcagagcacggatccccttcacagcctgcctgcaggccttc
acagagccggagaacgtcccagacttctggagctcagcgctgcaggccaagtcagctgga
gtcaagacctctcgttttgcctccttcccagagtatctgattgtgcagatcaagaaattc
acttttggggtcgactgggtgccgaagaagctagacttggccatagacgttccagacttc
ttggatctgagcaggctgagagcctctgggctgcaggcgagtgaagaggagctgcctgac
cttatgcctcccatcgtgctaccggaagacaccagagataactccatgggctcctcagac
tctccagaaatagacgaggcggcagtaatgcagctggcggagatgggctttccgctggag
gcctgcaggaaggcggtctactacacaggcaacatgggccccgagatggccttcaactgg
atcatagcccacatggaggagccggactttgcagaaccgctcactctgccctccatgatg
gatcccggtccctccaccagcgatagccccatgggcgccaccccgctggccaactcgccc
cctgaggagagcatcgccattctcacttcaatgggcttcccccgcgctcacagcatccag
gcactcaaagccacgaacaataacctcgaacgagcacttgattggatcttcacccacccg
gaggaggaagagagcgacgccctttcagacatggctgacacggagcccaacgacaacgct
ttctccaacgccaactcacacagtgactccacgctgtccccagacagagacacgtcgggc
ccgcgggtcaaagacggaccgggacgttatgagctctttgctttcatcagtcacatggga
gcatccacaatgtctggacattatgtttgtcacatcaaaaaggagggaaggtgggtgatc
tacaacgaccacaaagtctgtttgtcagaaaggcctccaaaagacttgggctacatctac
ttttaccatcgactgtcgagcagttaa
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