Epinephelus lanceolatus (giant grouper): 117255581
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Entry
117255581 CDS
T07331
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ely01002
]
117255581 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117255581 (usp47)
Enzymes [BR:
ely01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117255581 (usp47)
Peptidases and inhibitors [BR:
ely01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117255581 (usp47)
Ubiquitin system [BR:
ely04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117255581 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
117255581
NCBI-ProteinID:
XP_033480545
LinkDB
All DBs
Position
1:33715424..33739932
Genome browser
AA seq
1383 aa
AA seq
DB search
MEMVPSEENQFVPKEGVFWSSRQSIFDEMKRISQIQNAAEEPRVLCIIQDITSAKTVNER
LTLNLPASTTLSKLYEDVAHKAGYVKATFDLAWGNTQDMAPLDHSSEMSLSDSGFEPGGK
RNFLQLTDKDGEQPQIASDESGTADSSGLDDSSQERFIGPLPRDGTAGCSGDYSSPSYSY
SSILNKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELD
MSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSTERVL
KPKSLLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYSAVEDFPEHIKNLVQKEKESEEQEKRQ
REIERNTCKIKLFCMHPVKMMMESKLEVHKDKTLREATEMAYKLMELDGVVSLDCCRLVK
YDEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRKPEQVFQPYKPGEVMVKVHV
VDLKSETIATPISVRAYLNQTITEFKQLIAQATGLSAENMRVVLERCYNDLRLLYVPNKT
LKAEGFFRSNKVFIESSESTDHEVAFTDSLLWKLLDRHGNTIRLLVLLPEQSPGTLANRT
LCQKVGGDSDAPFEGSKGNRKSVEAILEESTEKLKNLSLQQQQGSSTSDSQKSSDASDFE
HIESPTQEADSNSSLCVAADNRELENRIRATAGGSSGASSDPENHFACEERSDSEVNNDR
STSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEED
SGTDSEYDDNGKSKAEAQYLYFRTEPCSQDDSSSDAQKSLVVHVDKRITLAAFKQNLEPY
VGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLV
NETEPCKFLVDTVFAKAMTVRQSKEELLPQLKEQCKLDLSIDSVRLRKKTWKNPGTVFLD
YHVYEEDISISSNWEVFLEVLNEPEKMKSMSQLAVLTRRWSPATMKLGPFQEVILESSSV
EELKEKLSEMSNIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLKVWPLYICDDG
AVVFYRDSTEEPMELSEEERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDP
GQD
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagagggtgtgttttggagt
agcagacagagtatttttgatgagatgaagaggatctctcagatccaaaatgcagctgag
gagcccagagtgctgtgtatcattcaggacatcaccagtgcgaagacggtcaatgagagg
ctgaccctcaacctgcctgcttccaccaccctctccaaactctatgaagatgttgcccac
aaagcaggatatgtgaaagccacctttgaccttgcctggggaaatacgcaggatatggca
ccactggaccacagcagtgagatgtccctctcagattcggggtttgagcctggtggtaag
aggaatttcctccagctcaccgacaaagatggagagcagcctcagattgcatcggatgag
tcaggaacagcagatagcagtggactggatgacagctcccaagagaggtttattgggccc
ctgccgagagacggcactgcaggctgcagtggtgactacagcagtccatcttactcctac
tcgtccatcctcaacaaatctgaaacaggttacgtgggcttggtcaaccaagctatgacc
tgctatttgaacagtcttctacaaacactgttcatgacgccagagttcagaaatgcgctc
tacaactgggagtttgaggagtctgaagaggatccagtcaccagtatcccctaccagctg
caaaggctgtttgttctgctgcagaccagtaagaaacgggcgatcgagaccactgatgtg
acgcggagctttggctgggacagcagcgaggcttggcagcagcatgacgtccaggagctg
tgcagggtcatgtttgatgccctggagcaaaagtggaagcagacagagcaggctgacctg
atcaaccagctgtaccaggggaagctgaaggattatgtccgttgtctggagtgtggctat
gagagctggaggattgatacgtacctggacatccctctcgtgatcagacccttcggagcc
agccaggcatacggcagtgtggaagaggctttgcaggcattcatccaaccagaaaccctg
gatgggcccaatcagtacttctgtgaacgctgcaaaaagaaatgtgatgcacggaagggt
ctgagatttctgcactttccgtacctgctgacacttcagctgaagcggtttgattttgac
tacaccactatgcatcgcatcaagcttaatgaccgcatgactttccctgaggagctcgac
atgagtccattcatcgatgtagaggatgagaagtcgcctcagacagagagctgcactgac
agcggagcagagaatgaagggagttgccacagcgaccagatgagcaacgatttctccacc
gatgattgtgtggatgagggcatctgcttggacagcaccagcagcacagagagggtgttg
aagccaaagagtttgctgacctttgagctgttctccgtcatggtccattctgggagcgct
gcgggtggccactactacgcctgcatcaagtccttcagtgatggccagtggtacagtttc
aatgatcaacatgttagcaagatcacacaagatgatatcaggaagacgtatggggggtcc
tcagggagcagaggctattattccagtgcctttgccagctcgacaaatgcatatatgttg
atttacagattgaaagatccctcaaggaatgcaaagtattcagctgtggaagacttccca
gagcacataaagaatctggttcagaaggagaaagagtctgaagagcaggagaagcgacag
agggagattgagcgcaacacttgcaagataaagctgttctgcatgcatcctgtgaagatg
atgatggagagcaagctggaagtacacaaggacaaaactctcagagaagcaacagagatg
gcctacaagctaatggagctggatggagtggtgtctctggactgctgccgcttggtaaag
tatgatgagttccacgagtacctggagcgctcctacgaaggtgaggaggacacgccgatg
ggcctgctgctgggaggagtcaagtcctcatatatgttcgacctgctgctcgagacccgc
aaaccagagcaagtgttccagccttacaaacctggagaggtaatggtgaaggttcatgtt
gtggatctgaagagcgagaccatcgccactccaatcagtgttcgggcgtacttgaaccag
acgatcactgaattcaaacagcttattgcacaggctacagggctatctgcagaaaacatg
cgtgtggtcctggagcgctgctacaatgatctccgactcctgtatgttccaaacaagaca
ctgaaagctgaggggttcttcaggagtaacaaggtttttatagagagctctgagtcgaca
gatcatgaggttgctttcactgactcgctcttgtggaaactgttggatcgtcacgggaat
acgatccggctcttggtcttgctgcctgagcagtctcctggtaccttggccaacaggact
ctttgccaaaaagtaggaggtgactctgatgcgccctttgagggttcaaagggtaatagg
aaatctgtagaggcgatcctggaggagagcacagaaaagttaaagaatctgtctctgcag
cagcagcagggctccagcaccagtgacagccagaaaagctctgacgccagcgactttgaa
catatcgaatccccgacccaagaggccgactcaaactcttcactgtgtgtggccgcagac
aacagagagttagagaaccggatcagggccacagccgggggtagcagcggtgcctcctct
gaccccgagaaccactttgcctgtgaggagcgctcggactctgaggtgaacaatgaccgc
agcacaagctcagtggacagcgacatcctgagctccagccacagcagtgacacgctgtgc
aatgcagacagcgggcccatacagctggccaacggcttggactcgcacagcatcacaagt
agccgtcgctccaaagcccatgagggcaaaaaagagacctgggacactgctgaagaagac
tctgggacagacagcgagtatgacgacaatgggaagagcaaggcggaggctcagtacctg
tacttcagaacagagccgtgttctcaggatgactcctcgtctgatgcacaaaaatctcta
gtggttcacgtggacaagagaataacattagcagcatttaagcagaacctggagccctac
gtgggagtcacttccacccagttcaaggtgtttcgggtatacgccaacaaccaggagttt
gagagcgtacggctcaatgaaacactgtcgtcattctctgatgacaacaagataaccatt
cgactaggaagagcactgaaaaagggtgaatacagagtgaaagtgtatcaactattagtg
aatgaaacagagccctgcaagttcctcgtggacacggtgtttgccaaggccatgactgtc
agacagtctaaagaggagctgctccctcagttgaaagagcagtgcaagcttgacctaagc
attgacagtgttcgtctcaggaaaaagacatggaagaacccaggcacggtgtttctggac
taccatgtctatgaagaagacatcagcatctcctccaactgggaagtcttcttggaagtt
cttaatgaaccagagaagatgaagtccatgtcgcagctggctgtcctgacccggaggtgg
agccccgccacgatgaagctggggcccttccaggaagttattctggagagcagcagtgta
gaagaactcaaggagaagcttagtgaaatgagcaatattcctctggaaaacctggagttt
gcaaagggtagaggaacatttccttgtgatatttccgtgttggagattcatcaggatttg
gactggaacccaaaagtgtcgactctaaaagtgtggcctctgtacatctgtgacgacgga
gcagtggtcttctacagggacagcacagaggaacctatggagctgtcagaggaggagcgc
aatgagctgatgaagaaggagagcagccgtctgctcaagactggacatcgtgtcagctac
tcaccacgcaaggagaaggccctcaagatctacctggacggaggccctgccaaagacccg
gggcaggactga
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integrated database retrieval system
