Epinephelus lanceolatus (giant grouper): 117262234
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Entry
117262234 CDS
T07331
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117262234 (ppfibp1b)
Membrane trafficking [BR:
ely04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117262234 (ppfibp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
DUF484
LMBR1
WHEP-TRS
USP8_interact
Motif
Other DBs
NCBI-GeneID:
117262234
NCBI-ProteinID:
XP_033490930
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All DBs
Position
11:19235240..19263998
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AA seq
1005 aa
AA seq
DB search
MMADASDMLAAALEQMDGIIAGSKALDYSNGLYDCQSPTSPFMGSLRALNLLEDLRSVLE
MMDTEERESLRCQIPDSTADSLVEWLHGHLSNGHLSLSGGDHYQERLTRIESDKESLVLQ
VSVLTDQVEAQGEKIRDLDLCLDEHREKLNATEEMLQQELLCRSALESQKLELISEVNNL
KLKLNTMDKDRLDFDDRFRDSEDLILEINELRYRLTELESEKVQYEKKLKSTKSLMAKLS
SLKIKMGQMQYEKQRKEHKLQAMKEELAILRRQLEGSDGEMRRLQDETGFKAMASSSSDP
TERGGKAGGITCLISHPDETLRKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELKQSL
LRYKKVQDMVMSVQGKKEKSKDNEHVESPSDGSIAFMSTYPVSVESEKYEVTDVEQMKRR
SPDELENLNGLSEEPSPTPSPSDPERVSKSAPTDEESSQDATKTGSQDQLDKSNNEKNTS
EEINKISEKPPMGPSATLPATVEDDSFGSRKARSSFGKGFFKIRGGKKTNSTPNLDRSRS
ASAPMLAETERQGTDHLDLAGLPQRSTNSDSTHTLPTTPEGRKKSKGIKKLFGKLKRSQS
TTFNLDDNLPEGEFKRGGVRATAGPRLGWSRDLQRANNDVDAPFARWSKDQVCDWLQGQG
LGLYVNMARVWISSGQTLLQASQQDLERELGIKHPLHRKKLQLALQALGSEEEDNKGKLD
YNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLR
LNNYEPNCLRRRPSDENNISPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVL
EPRFNVETMALLLNIPPNKTLLRRHLATHFNLLIGSEAQQLKQECLENPDYTLLTATTKV
KPRKLSFGNFGSLRKKKHEDNEEYVCPMDVEMPKGRSFQKGFELQIYEDDLDRLEQMEDS
EGTVRQIGAFSEGIQNLTSMLKDDEFFKEASNSPNPSVTDEDSNA
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatgccagcgacatgttggcagctgccctggagcagatggacggcattata
gcaggctccaaggctctggactactccaatgggctgtatgactgccagtcacccacctct
cctttcatgggcagcctgcgggcgcttaaccttttggaagacctgaggagtgtcctggag
atgatggacacagaggaaagggagagtctacgctgccagatccctgactccacagctgac
agtctggtcgagtggcttcatggtcacctgtccaatgggcacctctctctgagtgggggt
gaccactaccaggaaaggctaacccgaatagagagtgataaggaatctctggttcttcag
gtgagtgtgctgacagaccaggtggaggctcagggagagaagattcgagacctggacttg
tgtttggacgagcacagggagaaactcaacgccactgaggagatgctgcaacaggagctt
ctgtgcagaagtgcactggagtcgcagaagcttgagctgatatccgaagtgaacaaccta
aagctgaagctgaataccatggacaaggacagacttgactttgatgacagatttagggac
agtgaggatttgattcttgaaattaatgaactgcggtacagattgacagagctggagagt
gaaaaagtacagtatgaaaagaaacttaaatccacaaagtcgctaatggctaagctttct
agcctgaaaatcaaaatgggccagatgcagtatgagaaacagaggaaggagcacaaactc
caggctatgaaggaggagctagccatactgaggaggcagctggagggctcagacggagag
atgaggaggctacaggatgagacaggcttcaaagccatggcctcgagcagctcagatccc
acagagagaggtgggaaagccggtggaatcacatgccttatctctcatccagatgaaact
cttagaaagaggctgaaagaaaaacatgtggaagtgcagagaatgaaaaaggcagttgag
tcgttgatggcagccaatgaagagaaggatcgtaagattgaggaactgaaacagtcgctg
ctgcgatataagaaagttcaagacatggttatgtcagtgcaagggaagaaagaaaaaagc
aaagacaacgagcatgtcgagagtcctagtgatggatccatcgcattcatgtcaacctac
cctgtgtctgtggagtcagaaaagtatgaagttacagatgttgagcaaatgaaaaggagg
agcccagatgagctggagaacctcaatggactgagtgaagagccctcaccaacaccgagc
ccttcagacccagaacgagtgtcaaagtctgcaccaacagacgaagaaagcagccaagat
gccacaaagactggcagccaggaccagctggataagagcaataatgaaaagaatacaagt
gaagagatcaataaaatcagtgaaaagccgcccatgggtccctctgccactttgcctgct
accgtagaggacgacagctttggctcaagaaaggctcgttcatcctttggaaagggcttc
ttcaagatccgtgggggcaagaagacaaacagtactcctaaccttgaccgcagccggagt
gcgagcgcgcctatgctagctgaaacagagcgacagggcactgaccatctggatctggcc
gggctgccacagagatcaaccaacagcgacagtacccacacactccccacgaccccggag
ggcaggaaaaaatccaaaggaataaagaaactctttgggaagttaaaaaggagtcagtct
accacctttaacctggatgacaacctaccagagggtgagttcaagaggggtggagtgcga
gccacagcaggacccagactgggttggtctcgtgacctccaaagagccaacaatgatgtt
gatgctccctttgcacgctggtcaaaggaccaggtgtgtgactggctgcaggggcagggt
ctcggcctttatgtgaacatggcccgtgtgtggatctcctctggacaaacgctgctacag
gcctcccaacaggacctggagagggagctgggcatcaaacacccgctgcacagaaagaag
ctgcagttggccctgcaggccctcggctcagaggaggaggataataagggaaagctggac
tacaactgggtgacgagatggctggatgacatcggtctgcctcagtataagacccagttt
gatgaggggagggtagatggtcgcatgctgcactacatgacagtggatgacctgctttct
ctgaaagtagggagtgtcctgcatcacctcagtatcaagagagctatccaagtgctccga
cttaataactacgagcccaactgcttgcgtcgtaggccatctgatgagaacaatatttct
ccagcagagatttcccagtggacaaaccatcgggttatggagtggctgcggtctgtggac
ctcgctgaatatgctcccaatctgagaggcagcggtgtgcacggaggcctgatggttttg
gagccacggttcaatgttgagaccatggctttgctgctgaacatcccccccaacaagaca
ctgctgcgccgtcacctcgccacacatttcaacctgctcattggctcagaggcccagcag
ctcaaacaggagtgtcttgaaaacccagactacactctgcttactgccactactaaagtc
aagccaaggaaactgtcgtttggtaactttggcagtctgaggaagaaaaagcatgaagac
aacgaggagtacgtgtgtccgatggatgtggagatgccaaagggacgaagctttcagaaa
ggtttcgagctccaaatctatgaggacgacctcgacaggctggaacagatggaggactct
gagggaactgtgagacagattggagcgttctctgaggggattcaaaacctgacgagcatg
ctaaaggatgatgaattcttcaaagaggcttcaaattcaccgaaccccagcgtaacagac
gaggactccaatgcatga
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