Epinephelus lanceolatus (giant grouper): 117269663
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Entry
117269663 CDS
T07331
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117269663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117269663
04121 Ubiquitin system [BR:
ely04121
]
117269663
03036 Chromosome and associated proteins [BR:
ely03036
]
117269663
Enzymes [BR:
ely01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
117269663
Transcription factors [BR:
ely03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
117269663
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
117269663
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
117269663
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
117269663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
117269663
NCBI-ProteinID:
XP_033502749
LinkDB
All DBs
Position
17:complement(21558310..21590674)
Genome browser
AA seq
1395 aa
AA seq
DB search
MAQAAETCAESGRRLRSICRRMYDENEDLSDVEEIANIRGFSVEEKLVSDSYSAQFVLLM
EGKDFSYEYVQRDALRTPLIFKEKDGLGIRMPDPEITVSEIKGLVGSRRPVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPDL
KLSQTEATNVISDMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
PHNLALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIHEIENRTKVNSKFRFPFYYEICWYVLERYLHCLTKRSYYSQEIRKE
PVLMDYETKANTESPSSDSRSQDMNEDSCETQVRDGQGEKPEKAAPDGPCSPDNRKGQHL
KAVLSIDSEDSCNPCSTSLEFPQTPSDSPASESQNKWTHLTEFELSGLKTLVEKLESLPE
NKKCVPEGIENPQALLEDMKVVLKEHADDDPKLAITGVPVVFWPKKAMKPRPPNRPKPKM
AASPASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIAPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSNG
VVNDELPNCWECPKCNHAGKTGKASKQKRGPGFKYASNLPGSLLKEPRLNRDSKEEPDPP
LVATATVTALTTATAVKRKAEREEMPKRKEEEPPKKRPPLLTLDGTPRPRLEDNPLRKKR
KLFDTNDEPIIVKKKKKLSKPDDPLTPKLLRQLKAENDHGDEEDDHEEHEDDGFSLERIH
LKGKSEYDDEDQEEDEEGEEEETVKKERDSSAEDKAKVLLSPLLRTSAVRESEQSSNSPR
AGPSSESGEAQERSATHLKARHQRRRLPNKELSKEFNQEIPKTEDCLSNQNHSSVKTEDG
QANHNRRPLKSEDSVTNHNRKPLKTEDTTTNQSRRVLKMEEGLANQNRRPLKTEDSLANQ
NHRPVKTEPENEVDDQKPRWPLNNGSSDLGDWLRHRGREVNEPPRGYSPLSWNRSTQITS
ICPRPLPCRSPPKCIQMERHVIRPPPISPPPDRLPLNDGEAHVMRREMWMTVFSHLTHRD
LCVCMRVCRTWNRWCCDKRLWKHINLNRCKSITPLMLSGIIRRQPVALDLSWTNISKKQL
SWLINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDN
RPGQLDNRSKLRNVEDLRLAGLDITDTSLRLIIRYMPSLSKLDLSYCNHVTDQSVNILTA
AGTTTRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFIAEMSVS
VQFELIEEKLLQKIS
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggccgcggaaacgtgtgctgaatctggacgcaggctgcgctccatctgccgg
aggatgtacgacgaaaacgaggatctgtccgatgtggaggaaattgcaaacatcaggggt
ttcagtgtggaggagaagcttgtgagtgacagttacagcgcccagtttgtcctcctcatg
gagggtaaagacttctcttatgaatatgtgcaaagggatgctctcaggaccccactcatt
ttcaaagagaaagatggactggggatcagaatgcctgatccagaaattacagtcagtgaa
attaaaggcttagttggaagtcgtcggcctgtggatgtcatggacgtgagcactcagaaa
ggctctgaaatgagcatggctcagtttgtgcgttattatgagacaccggaggaagagcgg
gacaaactcttcaacgtcatcagcttagagttcagccacactaagctggagaacctcatc
aagcggcccacagtggtggatcaagtggactgggtggacaacatgtggcctcctgatctg
aaactcagccaaacagaagccaccaatgtcatctcagacatgaagtaccctaaagtacaa
aggtactgtttgatgagtgtgaagggctgctatacagacttccacatcgattttggtgga
acttctgtttggtatcatgtattcaagggccagaaagtgttttggctcgtgcctccgacc
cctcataaccttgccctttatgaggactgggtcctgtcaggcaagcagagcgatatcttc
ctgggagaccgggctgatggatgccagagagtggagcttaagcaaggatacaccttcttc
atcccatctgggtggattcatgctgtctacactccagaggacacgctggtgttcggaggc
aatattctgcacagcttcaacattcctatgcagctcaccatccatgagatagagaatagg
actaaggttaactccaagttccgtttcccattctactatgagatatgctggtatgtcctg
gagagatacctgcactgcctaaccaaacgctcctactattctcaggagatccgcaaagag
cctgtgctaatggactatgagactaaggcaaacacagagagcccctcctctgactccagg
agccaggacatgaacgaggactcgtgtgagactcaagtcagggatggccagggggaaaaa
ccagagaaggctgccccggatggcccttgctctcctgacaaccggaagggccaacacctc
aaagctgttttatctattgactccgaggacagctgtaatccttgctccacctctctagag
ttcccccaaaccccctctgactctccagcctcggagtctcagaataaatggacgcatttg
accgagtttgaactgagtggactcaagacgctggttgagaagctggagtctctgcctgaa
aataagaagtgtgttccagagggaatcgaaaacccacaagccctgctggaggacatgaag
gttgtcttaaaagaacatgcagatgacgatccaaaattagcgatcactggagttcctgtg
gtgttctggcccaagaaagctatgaagccccggcctcccaaccggccgaaacctaagatg
gcagcttctcctgcatcagcagtcaagctgtcagccagtcggggaacatctggtgccagg
aggagaaggacgcgctgtcggaagtgcgaggcatgcctgcgaacggagtgcggagagtgc
cacttttgtaaagacatgaagaagtttggtgggccgggccggatgaaacagtcctgcatc
atgaggcagtgcattgcacccgtcctgccccacacagcggtgtgtctcgtctgcggagag
gcagggaaagaggacacagtggaggacgaggaggagaagtttaaccttatgctcatggag
tgctccatctgcaatgagattgttcatcccaactgtcttaaggtaaaagattcaaatgga
gtcgtcaatgacgagttgccaaactgctgggagtgcccaaagtgcaaccatgctgggaaa
acagggaaagcctcaaagcaaaaaagggggccaggattcaagtacgcgtcaaaccttcct
ggctctctgctgaaagaaccccggttaaaccgggattcaaaagaggagcccgacccaccg
ctggtggctacagcaactgttactgctttgactaccgccactgctgtgaaaagaaaggcc
gagcgggaggaaatgccgaagaggaaagaggaagagcctccaaagaaacgtccccctttg
ctgactttggatggtacgccccgaccgaggcttgaggacaaccctctgaggaaaaagagg
aaactttttgacaccaatgacgaacctatcattgtgaaaaagaagaagaagctttcaaaa
ccagatgatcctttgactcccaagctgctgaggcaactcaaggcagagaatgatcacggg
gatgaggaggatgatcacgaggaacacgaagatgatgggttttccttggaaaggattcat
ttaaaggggaaaagtgagtatgatgacgaggaccaagaagaggatgaggagggagaggaa
gaggagacagtgaaaaaagaacgagacagcagcgcagaggacaaagccaaggtcctgttg
agtccactgctgagaacatccgcagtcagagaaagtgaacagtcctccaactcacctaga
gctggacccagcagcgaatcaggagaggctcaggagaggagcgctactcatctaaaggct
cgccatcagcgtcgacgcctccccaacaaagagctgagcaaagagttcaaccaggagatt
cccaagacagaagactgtctgtcaaaccaaaaccacagctcagtgaagacggaggacggt
caagccaatcacaatcgaagaccgctgaagagcgaggactctgtgactaatcacaaccgt
aaaccactaaaaacagaggacacaaccactaatcagagccgcagggttctaaaaatggag
gaaggtttggccaatcagaacagacgcccactgaaaacagaggacagcctggccaatcaa
aaccacaggcctgtaaaaactgagcctgagaacgaagtagacgaccaaaagccgagatgg
cctcttaataacggcagcagcgacctgggcgactggctgcgacacagggggcgggaggtg
aatgagccgccacgtggttactcaccactcagctggaacagaagcacgcagatcacatca
atatgtccccgcccactcccctgccggtcaccaccaaaatgtatccaaatggagcgccac
gtgatccgaccccctcccattagccccccgccggacagactcccactgaacgacggtgaa
gcccacgtgatgcgcagagagatgtggatgacagtgttcagtcacttgactcacagagat
ctttgtgtctgcatgcgtgtctgcaggacctggaacagatggtgctgcgacaagaggctt
tggaagcacatcaatctgaaccgttgtaagtccatcacacctctcatgctgagcggcatc
atccggagacagccggtagctctggacctcagctggaccaacatctccaagaaacaactc
agctggctcatcaacagactgccaggtctgcgtgtgctgctgttgtcaggatgctcctgg
gtggcagtctctgctctttgcacctccagctgtcctcttctgcgaactctggatgttcaa
tgggtggagggacttaaagacgcccagatgagagacctgctgtcgcctcctacagataac
aggccaggtcagctggataacaggagtaaactgcgtaacgtggaggacctgcgtctggca
ggcttggacatcacggacacgtctctgcgcctcatcatacgatacatgccctcgctgtcc
aagctggacctcagctactgcaaccacgtcactgaccagtctgtcaacatcctgactgct
gcggggacgaccaccagagactcgctcactgacatcaacctgtcagtctgtaacagggtc
acagaccagtcgctgacctatttcaagcgctgtgggagcatatgtcacatcgatctgcga
tactgcaaacaggtgaccaaggaaggatgcgaccagttcatcgcagaaatgtctgtgagc
gtgcagtttgaactgatagaggagaaactgctgcagaagatcagttag
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