Epinephelus lanceolatus (giant grouper): 117270043
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Entry
117270043 CDS
T07331
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117270043
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117270043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
PRY
Golgin_A5
UPF0242
ISG65-75
zf-RING_6
U-box
Prok-RING_4
GAS
DUF2130
FliD_C
DUF4407
MAP65_ASE1
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
117270043
NCBI-ProteinID:
XP_033503348
LinkDB
All DBs
Position
17:complement(5396405..5400348)
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AA seq
637 aa
AA seq
DB search
MLVDRGYKHTVPPLPGIKQTVIVPPSSSCSQTQPILSVYVSCFLHPPQICQCTDGCNQHA
VTCKSWHLMYCRTASVLCLSHGETISLSLFLLGEMAQRGIQLDEEKLSCSICLDLLKDPV
TIPCGHSYCMSCIKNYWDEEDQKEIHSCPQCRQTFGPRPALGRNTVLADLVEELKKTGLQ
AAPADHCYAEPEYVGCDFCTGRKVKAVKSCLQCLVSYCEQHLQPHHEIVPLKKHKLVDPS
KKLQENVCTRHSEVMKIFCRTDQQCICYLCSMDEHKGHDTVSAAAEMTEKQKELGATRQK
IQQRIQNREKDVKALQQEVEAINRSADKAVEDIKKIFTDAKQQIRSRQKSGVTLANELQE
KLEQEIADLRRKDAELGQLSHADDHIQFLHNYILLSRLSEATDSSGVKIRPLRYTEDMTA
AVSGVRDKLQDILSEEWTKISLTGSEDVLLAQAEPKTRAEFLKYSCQIRLNRNTSGMDNL
GITDGLKAKYCENNYNYCRHPDSFTDWPQVLCRESLTGRCYWEVKWKGSGIFVAVAYKTI
SRTGRDSIFGHNDKSWALECFHDSYEFRHKNIITPISGPHSSRVGVYLDHGAGTLCFYSV
SDSTMTLLYRVQTTFTQPLCPGFGLYVYGSYAEICKA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgttggtagacaggggctataagcacacagtgcctcctcttcctggaataaagcaaact
gtcatagtccctccctcttcttcctgctcccaaacacagccaatcctctcagtctacgtt
tcctgcttcctccacccaccacagatctgccagtgtacagatgggtgtaaccagcatgct
gtgacctgcaagagttggcatcttatgtactgcagaacagcaagtgttctgtgcttatct
catggtgaaactatttcactttcactgtttcttctaggtgaaatggcgcagcgaggaatt
cagctggatgaggaaaaactctcctgctcgatctgtctggatctactgaaggatccggtg
actattccctgtggacacagctactgtatgagctgtattaaaaactactgggatgaagag
gatcagaaagaaatccacagctgccctcagtgcaggcagacctttggaccgaggcctgct
ctggggagaaacacagtgttggcagatttagtggaggaattgaagaagacaggactccaa
gctgctcctgctgatcactgctacgctgaacctgaatatgtgggctgtgatttctgcact
gggaggaaggtgaaagctgtcaagtcctgtctgcagtgtctggtctcgtactgtgagcag
cacctccagcctcaccatgaaattgttccattaaagaaacacaagctggtggacccctcc
aagaagcttcaggagaacgtctgtactcgtcacagtgaggtgatgaagattttctgccgc
actgatcagcagtgtatctgttatctgtgctccatggatgaacataaaggccacgacaca
gtctcagctgcagcagaaatgactgagaagcagaaagagctcggggcgactcgacaaaag
atccagcagagaatccagaacagagagaaagatgtgaaggcgcttcagcaggaggtggag
gctatcaatcgctctgctgataaagctgtggaggacatcaagaagatcttcacagacgcg
aagcagcagatcagatctcgtcagaaatccggggtgactctcgccaatgagcttcaggag
aagttggagcaggagatcgctgatctgaggaggaaagatgctgagctggggcagctctca
cacgcagatgaccacatccagtttttgcacaattacattttgctgtcacgacttagtgaa
gctacagattcatccggagtgaagatccgtcctctgaggtacactgaggatatgactgca
gctgtgtcaggggtcagagataaactgcaggacattcttagtgaggagtggaccaagata
tcactgacagggtctgaagatgttttactggcacaggcagagcccaagaccagagctgaa
ttcctcaaatattcatgtcaaatcagactgaatagaaacacatcaggcatggacaacctg
ggtattacagatggcctaaaggcaaaatactgtgaaaacaattacaactattgtcgtcac
ccagacagttttactgactggcctcaggttttgtgtagagaaagcctgactgggcgttgt
tactgggaggtgaagtggaaagggagtggcatttttgtagcagttgcatacaagactatt
agcagaacaggaagagacagtatatttggacacaatgacaagtcttgggccttggagtgt
ttccatgatagttatgaattcagacataaaaacatcatcactcccatctcaggtcctcac
tcctccagagtaggagtgtacctggatcatggggcaggcactctgtgtttctacagcgtc
tctgactccacgatgactctcctctacagagtccagaccacattcactcagcctctctgt
cctggatttggtctgtatgtttatggatcctacgctgaaatctgtaaagcttaa
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