Epinephelus lanceolatus (giant grouper): 117270693
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Entry
117270693 CDS
T07331
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely02010
ABC transporters
ely04146
Peroxisome
ely04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117270693 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117270693 (abcd4)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
117270693 (abcd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ely02000
]
117270693 (abcd4)
Enzymes [BR:
ely01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
117270693 (abcd4)
Transporters [BR:
ely02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
117270693 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
AAA_7
FtsK_SpoIIIE
AAA_5
DUF87
NACHT
CoV_E
nSTAND1
bpMoxR
Motif
Other DBs
NCBI-GeneID:
117270693
NCBI-ProteinID:
XP_033504321
LinkDB
All DBs
Position
18:complement(15546071..15563532)
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AA seq
629 aa
AA seq
DB search
MPRLEKTNGRGTKRLKLDWKFVERFCGIQKVLFPSWTSQSVLMFGTLLAVTLTEQLIIYQ
VGILPSHFYNVLADQDYSGFKSLVGTAMVLILLNSTLKSIDQYICNQMYVSWRKTLTESL
HTSYFQGRVYYTLNVLREDIDNPDQRISQDAERLCKQMSTMASRLIVSPFTLAYYTYHCF
QSTGWIGPVSIFGYFVVGTIANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFY
RAGKVEHMRTNRRLQALLLTQKSLINKELWLYIGVNTFDYLGGFLSYIIIAIPIFTGIYD
GLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGELREVMDDILRKQC
DYDPASGESYDFDSDFNVHAGPADTAFILDHLSYKSPYSEELLVEDLSLKISQGTHLLVV
GNTGTGKTSLLRVLNRLWEAHSGFVQMTTCFGPRGTLFLPQKPYLTDGTLREQVIYPLKD
IYPASGDTHNVSVLSPGSVDDDRIIQFLELAGVSSLLKRTGGLDEKVDWNWYDVLSPGEM
QRLSFARLFYLQPAYAVLDEATSALTEEAEAQLYKTCKQLGMTLVSLGHRSTLEKYHDVQ
LKLCGEGRWELTKLKGGSGTSLSLREEAT
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtttggaaaagacaaatggcagagggacaaaaagactaaaattagactggaag
tttgtcgagaggttctgcggcatccagaaggtcctgttcccatcatggaccagtcaaagt
gtgctgatgttcgggacgctgcttgctgtcactctgacagagcagctgatcatttaccaa
gtgggcatcctccccagccacttctacaatgtgctggcagaccaagattactccggcttc
aagagtctggtgggcacagctatggtgctcatcttgctcaactccacactgaaaagtatc
gaccagtacatttgcaatcagatgtacgttagctggagaaagacgctaactgagagcctc
cacacgtcctacttccagggccgagtctattacacactcaatgtactcagagaggatata
gacaacccagaccagcgaatcagtcaggacgcagagaggttgtgtaagcagatgagcacc
atggctagtcgtttgattgtgtcaccgttcacactggcttactacacctaccactgcttt
cagagcaccggttggatcggtcctgtgagtatctttggctactttgtcgttgggaccatt
gccaataaaatcctcatggggccgattgtgtcaactctgtttgaacaggaaaaactggag
ggagacttcagattcaagcacatgcagatccgtgtcaacgcagaatctgcagctttttac
agagccggtaaagtggagcacatgaggaccaaccgcaggctgcaggctctgttactaact
cagaagagtctaataaacaaagagctctggctttatatcggggtaaacacctttgactac
cttggaggtttcctcagctacattataatcgccattcccatcttcactggtatctacgat
ggtctcactcctggtgagctcagtgcactcatcagtaagaacgcctttgtgtgcatctac
ttgataaatggcttcacgcagctaatagacctgtcaaccactctgtcagatgtggctgga
tacacccacaggattggggagttgagggaggtgatggatgacatcctacgcaagcagtgt
gactatgacccagcatcaggggaaagctacgactttgacagtgacttcaacgtccacgca
ggcccagcagacactgccttcatcctggaccatctttcttacaaatctccatactcagag
gagctgctggtggaggatctgagtctgaaaatcagccaggggacacatctgctggtagtg
gggaacacaggcaccggcaagacgtcactactgagggtccttaaccgactgtgggaggca
catagtggttttgtgcagatgacgacatgtttcgggcccagaggaaccctcttcctgcca
cagaaaccttacctgacagacggcacactgcgcgaacaggtgatctacccactgaaggat
atttaccctgcatcaggtgatactcataatgtgagtgtcctctctccagggtcagtggac
gatgacagaatcatacagttcctggaactagctggagtgtccagcctcctaaagcggaca
ggcgggttggatgaaaaggtggactggaactggtacgatgttctgtctccaggtgaaatg
cagcgtctctcctttgcacgcctcttctacctgcagcccgcatatgcagtgttggatgaa
gccaccagtgctctgacagaggaggcagaagcacaactgtacaaaacctgtaaacagctc
ggtatgactttggtcagtctgggacaccgcagcaccctggagaagtaccatgatgtccag
ttgaagctgtgtggagaaggccggtgggagttaaccaaactaaaaggaggcagcgggact
agtctcagtcttagagaagaagccacatga
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