Epinephelus lanceolatus (giant grouper): 117271911
Help
Entry
117271911 CDS
T07331
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117271911
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117271911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-RING_10
Prok-RING_4
Gp58
Fib_alpha
PRP1_N
Motif
Other DBs
NCBI-GeneID:
117271911
NCBI-ProteinID:
XP_033506343
LinkDB
All DBs
Position
19:complement(19132600..19152030)
Genome browser
AA seq
558 aa
AA seq
DB search
MAQKGVELDQETFSCSICLDLLKDPVTIPCGHSYCMNCIKTHWDEEDGKKIYSCPQCRQS
FTPRPVLVRNTMLAVLVEELKKTGLQAAPADHCYAGAEDVACDVCTGRKLKALKSCLVCV
ASFCEKHLQFHYDSAPFRKHKLVEPSKKLQENICSRHDEVMKIFCRTDQQSICYLCSMDE
HKGHDTVSAAAERTERQRELEVSRQNIQQIIQDREKDVKLLQQEVEAISRSADKAVEDSE
KIFTELIRLMEERRSDVEQQVRSQQETEVSRVKELQEKLEQEITELKRKDAELEELSHTE
DHTQFLHNYPSLSALSESTHSSSINIRPLSYFEDVTAAVSEVRDKLQEFLRETWANVSLT
VTDMDVLLSDPEPKTRAWFLKYSREITLDPNTANEFLLLSEGNRKVTFMRQQQSYPSHPD
NFTEEFQVLRRESLTGRCYWEVEWSGGKVCVAVAYKNIKREGTSYGCRFGFNKKSWALYC
HENCYVFWYNNVKTPVSGPQSSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYA
GLWLRYADGNTAELCELK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttgagctggaccaagaaaccttctcttgttccatctgtctggat
ctactgaaggatccagtgactattccctgtggacacagctactgcatgaactgtattaaa
acccactgggatgaagaggatgggaagaaaatctacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctggtgagaaacaccatgttagcagttttagtggaggaactg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggagaaaactgaaagccctcaagtcctgtttggtgtgtgtg
gcctctttctgtgagaaacaccttcaatttcattatgactcagctccgttcaggaaacac
aagctggtggagccctccaagaagctgcaggagaacatctgctctcgtcatgatgaggtg
atgaagattttctgccgcactgatcagcagagtatctgttatctctgctcgatggatgaa
cataaaggccacgacacagtgtcagctgcagcagaaaggactgagaggcagagagagctg
gaggtgagtcgacaaaacatccagcagataatccaggacagagagaaagatgtgaagctg
ctccaacaggaggtggaggctatcagtcgctctgctgataaagcagtggaggacagtgag
aagatcttcactgagctgatccgtctcatggaggaaagacgctctgatgtggagcagcag
gtcagatcacagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggaggagctctcacacacagag
gatcacacccagtttctgcacaactacccctcactgtcagcactcagtgaatccacacac
tcatccagcatcaacatccgtcctctgagctactttgaggatgtgacagcagctgtgtca
gaagtcagagataaactacaggaatttctgagggagacatgggcaaacgtctcactgaca
gtgactgacatggatgttttactgtcagacccagagcccaagaccagagcttggttctta
aaatattcacgtgaaatcacactggatccaaacacagcaaatgaattcctgttattatct
gaagggaacagaaaggtaacattcatgagacaacaacagtcttatcccagtcacccagac
aatttcactgaagagtttcaggtcctgagaagagagagtctgactggacgttgttactgg
gaggtggagtggagcgggggaaaggtctgtgtagcagtcgcatacaagaatatcaaaaga
gaagggacctcttatggttgcagatttggattcaataaaaaatcttgggcgttatattgt
catgagaactgttatgtattttggtacaataatgtcaaaactcccgtctcaggtcctcag
tcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctctatgct
ggactctggcttcgttatgccgatgggaacacagctgagttgtgtgagctcaaatag
DBGET
integrated database retrieval system
