Epinephelus lanceolatus (giant grouper): 117272210
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Entry
117272210 CDS
T07331
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117272210
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117272210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_10
CCDC47
FliD_C
zf-RING_11
Alanine_zipper
U-box
Gp58
DUF4455
WDCP
PRP1_N
Motif
Other DBs
NCBI-GeneID:
117272210
NCBI-ProteinID:
XP_033506895
LinkDB
All DBs
Position
19:1160274..1162415
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AA seq
557 aa
AA seq
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MAQQGAQLDPLKFSCSICLDLLKDPGTLPCGHSYCINCIQSFWDGEDEKRIYSCPQCRQS
FTPRPVLRKNTMLADLVEKLKKTGLQAAPADHCYAGAEDVACDVCTGRKLKAFKSCLQCV
ASYCEKHLQPHRDSAPLQKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRQNIQQRIQDTEKDVKLLQQEVEAISRSADKAVEHSE
KIFTELIRLMEKRRSDVKQQLRWQQETEVSRVKELQEKLEQEITELKRKDAELKQLSHTE
DHKQFLHNYPSLSALSEPTHSSSINIRPHRYFEDVTAAVSGVRDKVQDALRDTWTNASLT
GTEVDVLLPQPEPKTRAEFFRYSRHITLDPNTVSTWLLLSEGNRKVTGMRQQQFYSHHPD
RFTGWRQVLSRESLTGRCYWEVEWRGGVYVAVAYKNIRRARWWWDECKFGHNDKSWMLTC
DNNSYNFYHNKVQTRVSGPRSSRVGVYLDHSAGILSFYSVSETMTLLHRVQTTFTQPLYA
GLCLCCSDSTAELCQVK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaaggagctcagctggaccccctaaagttctcttgttccatctgtctggat
ctactgaaggatccggggactcttccctgtggacacagctactgcatcaactgtattcaa
agcttctgggatggagaggatgagaagagaatctacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgaggaaaaacaccatgttagcagatttagtggagaaactg
aagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgaaagccttcaagtcctgtctgcagtgtgtg
gcctcttactgtgagaaacacctccagcctcatcgtgactcggctccattacagaaacac
aagctggtggagccctccaagaagctgcaggagaacatctgctctcgtcatgatgaggtg
atgaagatgttctgccgcactgatcagcagtgtatctgttatctctgctctgtggatgaa
cataaaggccacgacacagtgtcagctgcagcagaaaggactgagaggcagagagagctg
gaggggagtcgacaaaacatccagcagagaatccaggacacagagaaagatgtgaagctg
ctccaacaggaggtggaggctatcagtcgctctgctgataaagcagtggagcacagtgag
aagatcttcactgagctgatccgtctcatggagaaaagacgctctgatgtgaagcagcag
ctcagatggcagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctgaagcagctctcacacacagag
gatcacaagcagtttctacacaactacccctcactgtcagcactcagtgaacccacacac
tcatccagcatcaacatccgtcctcaccgctactttgaggatgtgacagcggctgtgtca
ggagtcagagataaagtacaggacgctctgagggacacatggacaaacgcctcactgaca
gggactgaagtggatgttttactgccacaaccagagcccaagaccagagctgagttcttc
agatattcacgtcacatcacactggatccaaacacagtcagcacatggctgttattatct
gaggggaacaggaaagtgacaggaatgagacaacaacagttttattctcatcacccagac
agattcactggatggcgtcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagaggaggagtttatgtagcagtcgcatacaagaatatcagacgagca
cgttggtggtgggatgaatgtaaatttggacacaatgacaaatcttggatgttaacatgt
gacaataacagttataacttttatcacaacaaagtccaaactcgtgtctcaggtcctcgg
tcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagcctctctatgct
ggactttgtctttgttgttctgattccacagctgagttgtgtcaagtcaaatag
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