Elizabethkingia sp. 2-6: FCS00_18165
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Entry
FCS00_18165 CDS
T06039
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
elz
Elizabethkingia sp. 2-6
Pathway
elz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FCS00_18165 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elz03019
]
FCS00_18165 (recQ)
03400 DNA repair and recombination proteins [BR:
elz03400
]
FCS00_18165 (recQ)
Enzymes [BR:
elz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FCS00_18165 (recQ)
Messenger RNA biogenesis [BR:
elz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FCS00_18165 (recQ)
DNA repair and recombination proteins [BR:
elz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FCS00_18165 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QCO48194
UniProt:
A0A4P8EAX5
LinkDB
All DBs
Position
3943297..3945504
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AA seq
735 aa
AA seq
DB search
MNTKSANIAESLKKYFGFTTFKGYQEQIISSLLEGSDVFVLMPTGGGKSLCYQLPALMSE
GTAIVVSPLIALMKNQVDAVNGLSSEEGVAHVLNSSLNKTQTKTVMDDIRNGRTKLLYVA
PESLIKEEYIDFFKEVPISFFAIDEAHCISEWGHDFRPEYRNLKSIIDKIADVPVIALTA
TATPKVQDDIQKTLGMTNALVYKESFNRPNLFYEVRPKVNIDKEIVKFIKAQNGKSGIVY
CLSRRKVEEFAQLLQVNGLNALPYHAGLDAKTRVTNQDKFLMEEVDVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGHCIAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYVETSMSRRQYLLYYFGEKFDPVNGAGAKMCDNSVNPPVLKDASKDLTKI
LSLVNDLGQKFRAKDLVAVIAGKENAVTKSYKLENNHHFGSGKDKEDNYWKSIIRQAVVQ
DFLLKDIETYGVLKLTKKGLDCIDGKLKSKFEIAEDRVYNLAETAKISSEVTLGNTARGL
DDKLFSLLKEVRKKVAQKNNIPPYTVFQDPSLEDMTVQYPISIDEISKIYGVGEGKAKKF
GKEFADFIKKYVEENDIDRPDDMVLKQVANKSSHKVFIIQNTDKKIDLEDIAKAKNLTMD
ELLSEMESIVYQGTKLNIDYYIDENFDEDIVEGFMEFMMESESDSMKTLCTEFSDELSDE
EIRMLRIKFISDVAN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaatctgcgaacatagcggagtcattgaaaaagtattttggctttacaaca
ttcaaagggtatcaggaacagattatatcttcacttttagaagggagtgatgtctttgtt
ctgatgccaacaggtggaggtaaatcattatgctaccagttgccggcattaatgagcgag
ggaacagctattgtggtttcaccactaatagcactaatgaaaaatcaggtagatgcggtt
aacgggctttcttctgaagagggagtagcacacgttcttaattcttcgttgaacaaaact
caaacgaaaactgtgatggatgatatccggaacggaaggacaaagttgctttatgtagct
ccggaatcgttgattaaagaggaatatatagatttctttaaagaagttcctatttcgttc
tttgcaatagacgaggcgcactgtatttcggaatggggacatgatttccgtccggaatac
agaaatttaaaaagtattatcgataaaattgcggatgttcctgttattgcattaacggct
acagcaactccgaaagttcaggatgatattcagaaaacactaggtatgacgaatgctctt
gtatataaagagtcattcaacagacccaacttattttatgaagtacgtccaaaagtaaac
atcgataaagagattgttaaatttattaaagctcaaaatggtaaatcagggattgtttac
tgtctcagcagaagaaaagtagaagaatttgcacagctgcttcaagtaaacggtcttaat
gcattaccataccatgctggtttagatgcaaaaacacgtgttaccaatcaggataaattt
ctgatggaagaagtagatgttattgtagcaactatagcattcggaatgggaattgacaaa
ccggatgtaagatttgtaattcattacgatataccaaaaagtttagaaagttattatcag
gaaacagggcgtgccggaagagatggtggagaaggacattgtattgctttctacgatccg
aaggatattgaaaagcttgaaaagtttttggctcagaaaccagtttcggaaagagagatt
ggactacaactgcttaacgaagtagtggggtatgttgaaacatctatgagtcgccgccag
tatctgctgtattattttggtgaaaagtttgatcctgtaaacggagctggtgccaagatg
tgtgataattcagtaaatccacctgtattaaaagatgcaagtaaggatttgacgaaaatt
ctaagtttggtaaatgatctgggacaaaaattcagagcaaaagatctggtcgctgtaatt
gcaggtaaagaaaatgccgtaaccaagtcttataaacttgaaaacaatcaccattttgga
agcggtaaagataaggaggataattactggaaatccattatccgacaggctgtagttcag
gattttttattaaaagatattgaaacctacggtgtactaaagcttacgaaaaaaggctta
gattgcatcgacggtaagctgaagtcgaagtttgaaatagcagaagacagagtctataat
ttggcagaaactgctaaaatatcttctgaagttacattaggaaatacagcgcgaggactg
gacgataaattgttcagcttactaaaagaggtaagaaaaaaagtagcacagaaaaataat
attccgccatatacggtattccaggatccaagtttggaggatatgacagtacaatatcct
attagtatagatgagatttctaagatatacggagtaggagaaggaaaagctaagaaattc
ggaaaggaatttgcggattttataaaaaaatatgtagaggaaaacgatatcgaccgtccg
gacgatatggtactaaagcaggtagcaaataaatccagtcataaagtttttattattcag
aatacggataagaaaattgatttggaagatattgctaaagctaaaaatctgacaatggac
gaattgctttccgaaatggagagtatcgtttatcagggaacgaaactaaatatcgattat
tatatcgatgagaattttgatgaggatatcgtagaagggtttatggaatttatgatggag
tctgagagcgatagtatgaagactttatgtaccgaattttctgacgaactttccgacgag
gaaatccgaatgctgcgtataaaatttattagcgatgtagcgaactaa
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