Escherichia marmotae: C1192_00965
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Entry
C1192_00965 CDS
T05353
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ema03400
]
C1192_00965
DNA repair and recombination proteins [BR:
ema03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
C1192_00965
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
UPF0547
AAA_16
SLFN-g3_helicase
zf-tcix
AAA_22
zinc_ribbon_2
zf-ribbon_3
AAA
DZR
Motif
Other DBs
NCBI-ProteinID:
AUT25856
UniProt:
A0A7L5X784
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All DBs
Position
complement(193713..195473)
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AA seq
586 aa
AA seq
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MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQSEFSLLIVDECH
RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
IISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIEDFKAQR
FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTILVDPDDMLKAALRLKDALVLRCSGMS
LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITA
ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacactccgtccatatcagcaagaagccgtggatgccacgctcaaccatttt
cgtcgtcataaaactcctgccgttatcgtactccctaccggtgcgggtaaaagtctggtg
atagcggaactggcacggctggcgcgtggtcgcgtgctggtgctggcacacgtcaaagaa
ctggtagcgcaaaaccatgcaaaatatcaggcgctggggctggaagcggatatttttgct
gccggactaaagcgcaaagagagccacggtaaagtagtatttggcagcgtacagtcggtc
gcccgcaatctcgacgcctttcagagtgaattttcactgttgattgtcgatgaatgccat
cgtattggcgacgacgaagagagccagtatcagcaaatccttactcacctgacaaaagtg
aatccccacttacgcctgctggggctgactgccacgccctttcggctggggaaaggctgg
atctatcagtttcattatcacggcatggtacgcggcgacgagaaagcccttttccgggac
tgcatttatgagttaccgctgcgctatatgattaaacacggttatctgacaccaccggaa
cggctggatatgccggtagtgcaatatgatttcagccgcttacaggcacagagcaacggg
ctgttcagcgaagctgatctcaaccgcgagctgaaaaaacagcaacgcattacgccacac
attattagccagattatggagttcgccgcaacgcgcaaaggggtgatgattttcgccgcg
acggtcgaacacgcaaaagagatcgttggtctactgcccgccgaagatgccgcgcttatt
accggcgacacgcccggcgctgaacgtgatgtattaattgaagattttaaagcccagcgt
tttcgctacctggtcaacgttgcggtactgaccaccggatttgacgcgccacatgtcgat
cttatcgccattctgcgccctaccgaatcggtaagtctttaccaacaaattgtcgggcgt
ggtctgcgtctggctccgggtaagacagattgcttaattcttgattatgcaggtaaccct
cacgatctctacgccccggaagtaggtacgccgaaaggcaaaagtgacaacgtcccggtg
caggttttctgccctgcctgcggctttgccaacacgttttggggcaaaacaaccgccgac
ggcacattgattgaacactttggtcgccgttgtcagggatggttcgaagatgacgacggg
catcgcgaacagtgtgattttcgcttccgctttaaaaactgcccccagtgcaatgcagaa
aatgacattgccgcgcgccgctgccgcgagtgcgacaccattctggttgatccggatgat
atgttaaaagcggcgctacggttgaaagatgctctggtgctacgctgtagcggcatgtct
ttacagcatgggcacgatgaaaaaggcgaatggctgaaaatcacctattacgatgaagat
ggtgctgatgtgagtgagcgcttccgtctgcaaacacccgcccagcgaaccgccttcgag
cagctttttatccgcccgcatacgcgcacaccgggcatccctctgcgctggataaccgcc
gccgatatcctcgcccagcaagcgttgctgcgccacccggattttgtcgttgcacgaatg
aaaggccagtactggcaggttcgtgaaaaagtgttcgattacgaaggccgttttcgtcgg
gcgcacgaattacgcggttaa
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