Eleginops maclovinus (Patagonian blennie): 134867137
Help
Entry
134867137 CDS
T09869
Symbol
lmo7a
Name
(RefSeq) LOW QUALITY PROTEIN: LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134867137 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emac04121
]
134867137 (lmo7a)
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
134867137 (lmo7a)
BRITE hierarchy
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
134867137
NCBI-ProteinID:
XP_063743549
LinkDB
All DBs
Position
7:complement(7550046..7593959)
Genome browser
AA seq
1518 aa
AA seq
DB search
MEWREQSAVSCDEAYLEAQRWIEAVTKKKLGSDDFRSALENGVLLCDLINNIKPGIIRRV
NRLPTPIAGLDNLNVFLKACGKLGLKEAQLFHPGDLQDLSTRVTVKDQETNRRLKNVLIT
IYWLGRRAQCDRIYDGPYLNFKAFEGLLGTALYKALQESPSQKGSSVRDSGFGDSWYSER
EELFQPRRRREGGGGGGGGGGHRRDDSLDSLDSLGSRPKSISSETTLKGSIEGFCSDTEA
DSLFRMSDNKDGLSYRRSVSITPKATAQFNQFLPSKDKASGYVPAPLRKKRAERNEENRR
SLVNPIYTEDEGALTRQRDMQESIDGSKSAVDIQVDSNLIRQVRYEELQKYREKTRESED
KWQDDLSKWKNRRRSVNSDIVKKKEEREKIEEITYSGSSSSSSSNNRRSKTFKEMQEERE
NKGRNSIGSRLGSLNYLDDDDVFDKPVLSPRTHTFPARSYTIDTPYYSSESSLKEVEPHA
ATPATGRAASPPTSRKVDIVDSSAGSYATTTITPALTPTVTPSSRRSYSPAPLQRSPVTE
RKSTVKTEETTNTFTPTLTPSIIPSSRRSQSPTAAPLQRSPVTERKSRVKTEETTTTVIS
SSSSVQKVLEPRRPLSRIQTEVGAPSSGFLYKQQPQTSSMEPKPPGVSRVSASLPRSYQK
SDSARITSVVTARPFGTQSSRLSSLPRPFTAVQTDTAPKRVNGSADVSKKSTVPSRYHQF
MTSEDEAQSQSSSVHSSEEEEEEEEEEEEKTTVKSVTSTKSVSPVLPQVRSETPVSPAPA
KEISQENYSEMRISLNQKPNSSKDFGFQAAWDSTGARVTTIQPGSTAEMCQLHVGDEVLA
VNGQQVAEMSYLDWKSCMEEALQEGSLVMDIRHHGKNNQPSLPYQSHKTINLTSMDHPIL
LGSSDSNAVSSSLDFTSRTSMEKLETKEAPAYPVIDVASNGVNGGFREQPVTMRNKESEP
ISLKNLKRRSEFFEKGGSESAMPDIPVPPITTSSSRWSWDPEEERKRQQKWHKEQERLLQ
EKYKRDQEKLQEEWIKAQQEVADSADEQEPESLVVDRHSLSPHSPLSPFNQPTFPSWEEE
EXKRKAEQERQGLEEEERERRRQAEEQERQRQAEERRKREEEERELLRLQEERKQKERQE
EEERKRREEEELRWQKRREEERRRQEFAEQQRREQERAQQQQWAGDYHGFANVQPSLSYT
DRTKSQSSPQLDEDEKPQRKGVYGQRGGMAHWLLEEQARNARDKQAQIQRATSELELERR
NILNAMRYREPERVTGSVMGDRTSKQSLSQAELERQQILNEMKKKTPMLRDKSWIRQNSA
TVGTTKESDAAPMRRGESLDNLDTSYNSWRSSWTPRSNSQTQNYSAPYSGGTSLYGGGHG
AQRPVSSTLPSSSSMGSLRGGAGTPSSPWSRQSSSPSPSSLSPATSPEPTSEAGAPPPQS
RSVSGKKICTFCDTPLGKGAAMIIESLGLCYHLSCFKCIDCKSNLGGSEAGAEVRIRNKQ
LHCNSCYMRFKAGQPTSM
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgtgagcagtccgctgtcagctgcgacgaggcttacttggaggcacagaga
tggattgaggcagtaaccaagaaaaaacttgggagcgacgacttccgatcagcgctggag
aatggagttctgttgtgtgatttgatcaacaacatcaagcctggaatcatcaggagagtt
aacaggctgccaacacctatagctggactggacaacctcaacgtcttcctaaaggcctgc
gggaagcttggactaaaggaagcacagctctttcacccgggagatcttcaggacttgtca
acaagagttacagtcaaggatcaagagaccaacaggaggctaaaaaatgtattgatcacc
atatactggctgggaagaagagctcagtgtgaccgtatctatgatggaccttacctgaat
ttcaaggcattcgaaggcttattgggcacagcactatacaaggctctgcaggaatcgccc
agtcagaaaggcagcagtgtcagagacagcggttttggagatagctggtactcagagcga
gaggagctcttccaaccgaggagaagaagagaaggaggaggaggaggaggaggaggcggc
ggacaccggagagacgactccctggacagcttggattctttaggctcccgacccaagagc
atctcatccgaaaccactcttaaaggtagcatcgagggtttttgcagtgacactgaggca
gactctctcttcaggatgtctgacaacaaagacggtcttagttaccgccggtcagtaagc
atcacacccaaggccacggcccagttcaaccagttcctgcccagtaaagacaaagcgtca
ggctacgtgccggctccgctgaggaagaaacgggccgaacgcaatgaggaaaatcgccgc
agcttggtcaaccccatatacacagaggatgaaggcgcactgaccagacagcgggatatg
caagagagtatcgacgggagtaaatcagcagtcgatatccaggttgactccaacctcatc
cggcaggttcgatacgaagagcttcagaagtatcgtgagaagacaagggaaagtgaggat
aagtggcaggatgacctgagtaaatggaagaaccggcgcaggagtgtcaactctgatata
gtgaagaaaaaagaggaaagggagaagatagaggagatcacgtacagcggcagcagcagc
agcagcagcagcaacaacagaaggtctaagaccttcaaggagatgcaagaggagagagaa
aataaaggaaggaacagcatcggcagccgtttaggatctctgaattacctggacgacgac
gacgtatttgataaacctgtcctttccccacgcacccacacctttcctgccaggagctac
actattgacactccttactattcctctgagtcttctctgaaagaggtcgaaccccacgct
gccaccccagctactggcagggccgcctcccctcccacctcaaggaaagttgacattgtg
gatagttctgcaggcagctacgccacaaccaccatcactcccgccttgacccccaccgtc
actcccagcagtcgcagatcttattctccagcacctttacagaggagtccagtcacagaa
cgcaaaagcacagtcaagacagaggagaccacaaacaccttcacccccaccttgactccc
agcatcattcccagcagccgcagatcgcagtctccaactgctgcacctttacagaggagt
ccagtcacagaacgcaaaagcagagtcaagacagaggagaccacaaccacagtcatctcc
tcttctagctccgtacaaaaggtgctggagcctaggcgcccattgtcgcgcatacagact
gaggtgggggccccctcctctggttttctgtacaaacaacaaccacagaccagctcaatg
gaacccaagcctcccggggtgtctcgggtttccgcctccctacccaggagctaccagaaa
tcggatagcgcacgtataacctcagttgtcaccgcaaggcccttcgggacccagtcatcc
cgcctcagctcactgccccgaccattcacagccgtacagacggacaccgctccgaagcgt
gtcaacggcagcgcagatgtctccaagaagtcgacagtgccgagccgctatcaccaattc
atgacctctgaggacgaggctcaatctcagtccagctcagttcacagcagtgaggaggag
gaggaagaggaggaggaagaagaagagaagaccaccgtgaagagcgtgacctctactaag
agtgtctcacctgtccttcctcaagtcaggagtgaaactccagtcagtcctgctccagcc
aaagaaattagccaggagaactactctgagatgcggatcagcctgaaccagaagcccaac
agcagcaaagactttggcttccaggcagcctgggactccacaggagctcgtgtcaccacc
atccagccaggcagcactgcagagatgtgccagctccatgtcggagacgaggtgctggcg
gtgaacgggcagcaggtggcagaaatgagctacctagactggaagtcctgcatggaggag
gctcttcaggagggcagtctggtcatggatatacgccatcatggcaagaacaatcaacct
tccctgccatatcaaagccataagaccatcaatctgaccagtatggatcatccgatactt
ctaggttcctctgactcaaacgcggtcagctccagcctggatttcacctcacgcacttcc
atggaaaagctggaaaccaaagaggcccccgcctaccccgtcatcgatgtggcttcaaac
ggagttaatggaggtttccgtgagcagccggtgaccatgaggaacaaagagtcagaaccc
atatctttgaaaaacttaaaacggaggtcagagttttttgaaaaaggaggatcagagtct
gcaatgccagatatacctgttcccccaatcactacctcttccagccgctggtcctgggac
ccagaagaggagcgtaaaagacagcagaaatggcataaggagcaggagcgcctcctacag
gagaaatataagcgtgaccaggagaagttgcaggaggagtggataaaggctcagcaggag
gttgccgacagcgcagacgaacaagagcccgagagcctggtggtggatagacacagcctc
agcccacactcacccctctcccccttcaaccagccaacttttccttcatgggaagaggaa
gagnaaaagaggaaggcggaacaggagcgccaagggctggaggaggaggagcgggaacgc
cgaagacaggcggaggagcaggagcgccaaaggcaggccgaggagaggaggaagagggaa
gaggaggagcgtgagctgctgcgtcttcaggaagagagaaagcagaaagaaaggcaggag
gaggaggagagaaagaggagggaggaggaagagctgagatggcagaaaaggagagaggag
gagaggaggcggcaggaatttgcagagcagcagcgcagagagcaggagagagcccagcag
cagcagtgggctggtgactaccatggctttgccaatgtccagccgtctctgtcctataca
gacaggacaaaatctcaatcatctccccagcttgatgaagatgaaaaacctcagagaaaa
ggtgtgtatgggcagcgggggggcatggctcactggctgctggaagagcaggcgaggaat
gcacgagataaacaggcccagattcagcgggctacatcagagctggagctggagaggaga
aacatcctcaatgccatgagatacagagagccggagagagtgacgggcagtgttatgggt
gacaggacgagtaagcagtccctgtctcaggcggagctggagcgccagcagatcctgaac
gagatgaagaagaagactccgatgctcagggacaaaagctggatccgacagaactccgcc
accgtcggcaccaccaaggagtccgacgcagcaccaatgcgcagaggtgagtctcttgac
aacttggacacctcctataactcctggcgctcctcatggactcccagaagcaactcccaa
acccaaaactactctgcgccgtactctggcggcacttccctttacggtggtggtcatggg
gcccagcgtcccgtctcctctaccctgccttcctcctcctccatgggctccctcagaggc
ggggcaggaaccccctcatccccttggtcccggcagtcatcttccccctctccttcctct
ctgtcacctgccacttctccagagccaacgtcggaggcaggcgcccctccgccgcagagc
aggtcagtgagtggaaagaaaatctgtacgttctgtgacaccccgctgggaaagggagca
gccatgatcatcgagtccctcgggctctgttatcatttgagctgttttaagtgcatcgac
tgtaagtctaacctcgggggatcggaggctggggctgaagtcagaatacgaaacaaacag
ctgcactgtaactcatgctacatgcggttcaaagctggccagccaacctctatgtga
DBGET
integrated database retrieval system
